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Effect of low-passage number on dengue consensus genomes and intra-host variant frequencies

Intra-host single nucleotide variants (iSNVs) have been increasingly used in genomic epidemiology to increase phylogenetic resolution and reconstruct fine-scale outbreak dynamics. These analyses are preferably done on sequence data from direct clinical samples, but in many cases due to low viral loa...

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Detalles Bibliográficos
Autores principales: Fung, Christian K., Li, Tao, Pollett, Simon, Alera, Maria Theresa, Yoon, In-Kyu, Hang, Jun, Macareo, Louis, Srikiatkhachorn, Anon, Ellison, Damon, Rothman, Alan L., Fernandez, Stefan, Jarman, Richard G., Maljkovic Berry, Irina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8515859/
https://www.ncbi.nlm.nih.gov/pubmed/33591246
http://dx.doi.org/10.1099/jgv.0.001553