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A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images

Gastric diffuse-type adenocarcinoma represents a disproportionately high percentage of cases of gastric cancers occurring in the young, and its relative incidence seems to be on the rise. Usually it affects the body of the stomach, and it presents shorter duration and worse prognosis compared with t...

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Autores principales: Kanavati, Fahdi, Tsuneki, Masayuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8516929/
https://www.ncbi.nlm.nih.gov/pubmed/34650155
http://dx.doi.org/10.1038/s41598-021-99940-3
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author Kanavati, Fahdi
Tsuneki, Masayuki
author_facet Kanavati, Fahdi
Tsuneki, Masayuki
author_sort Kanavati, Fahdi
collection PubMed
description Gastric diffuse-type adenocarcinoma represents a disproportionately high percentage of cases of gastric cancers occurring in the young, and its relative incidence seems to be on the rise. Usually it affects the body of the stomach, and it presents shorter duration and worse prognosis compared with the differentiated (intestinal) type adenocarcinoma. The main difficulty encountered in the differential diagnosis of gastric adenocarcinomas occurs with the diffuse-type. As the cancer cells of diffuse-type adenocarcinoma are often single and inconspicuous in a background desmoplaia and inflammation, it can often be mistaken for a wide variety of non-neoplastic lesions including gastritis or reactive endothelial cells seen in granulation tissue. In this study we trained deep learning models to classify gastric diffuse-type adenocarcinoma from WSIs. We evaluated the models on five test sets obtained from distinct sources, achieving receiver operator curve (ROC) area under the curves (AUCs) in the range of 0.95–0.99. The highly promising results demonstrate the potential of AI-based computational pathology for aiding pathologists in their diagnostic workflow system.
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spelling pubmed-85169292021-10-15 A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images Kanavati, Fahdi Tsuneki, Masayuki Sci Rep Article Gastric diffuse-type adenocarcinoma represents a disproportionately high percentage of cases of gastric cancers occurring in the young, and its relative incidence seems to be on the rise. Usually it affects the body of the stomach, and it presents shorter duration and worse prognosis compared with the differentiated (intestinal) type adenocarcinoma. The main difficulty encountered in the differential diagnosis of gastric adenocarcinomas occurs with the diffuse-type. As the cancer cells of diffuse-type adenocarcinoma are often single and inconspicuous in a background desmoplaia and inflammation, it can often be mistaken for a wide variety of non-neoplastic lesions including gastritis or reactive endothelial cells seen in granulation tissue. In this study we trained deep learning models to classify gastric diffuse-type adenocarcinoma from WSIs. We evaluated the models on five test sets obtained from distinct sources, achieving receiver operator curve (ROC) area under the curves (AUCs) in the range of 0.95–0.99. The highly promising results demonstrate the potential of AI-based computational pathology for aiding pathologists in their diagnostic workflow system. Nature Publishing Group UK 2021-10-14 /pmc/articles/PMC8516929/ /pubmed/34650155 http://dx.doi.org/10.1038/s41598-021-99940-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kanavati, Fahdi
Tsuneki, Masayuki
A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images
title A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images
title_full A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images
title_fullStr A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images
title_full_unstemmed A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images
title_short A deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images
title_sort deep learning model for gastric diffuse-type adenocarcinoma classification in whole slide images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8516929/
https://www.ncbi.nlm.nih.gov/pubmed/34650155
http://dx.doi.org/10.1038/s41598-021-99940-3
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