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The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity
The way chemical transformations are described by models based on microscopic reversibility does not take into account the irreversibility of natural processes, and therefore, in complex chemical networks working in open systems, misunderstandings may arise about the origin and causes of the stabili...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8518807/ https://www.ncbi.nlm.nih.gov/pubmed/34259350 http://dx.doi.org/10.1002/chem.202101562 |
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author | Ribó, Josep M. Hochberg, David |
author_facet | Ribó, Josep M. Hochberg, David |
author_sort | Ribó, Josep M. |
collection | PubMed |
description | The way chemical transformations are described by models based on microscopic reversibility does not take into account the irreversibility of natural processes, and therefore, in complex chemical networks working in open systems, misunderstandings may arise about the origin and causes of the stability of non‐equilibrium stationary states, and general constraints on evolution in systems that are far from equilibrium. In order to be correctly simulated and understood, the chemical behavior of complex systems requires time‐dependent models, otherwise the irreversibility of natural phenomena is overlooked. Micro reversible models based on the reaction‐coordinate model are time invariant and are therefore unable to explain the evolution of open dissipative systems. The important points necessary for improving the modeling and simulations of complex chemical systems are: a) understanding the physical potential related to the entropy production rate, which is in general an inexact differential of a state function, and b) the interpretation and application of the so‐called general evolution criterion (GEC), which is the general thermodynamic constraint for the evolution of dissipative chemical systems. |
format | Online Article Text |
id | pubmed-8518807 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85188072021-10-21 The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity Ribó, Josep M. Hochberg, David Chemistry Concepts The way chemical transformations are described by models based on microscopic reversibility does not take into account the irreversibility of natural processes, and therefore, in complex chemical networks working in open systems, misunderstandings may arise about the origin and causes of the stability of non‐equilibrium stationary states, and general constraints on evolution in systems that are far from equilibrium. In order to be correctly simulated and understood, the chemical behavior of complex systems requires time‐dependent models, otherwise the irreversibility of natural phenomena is overlooked. Micro reversible models based on the reaction‐coordinate model are time invariant and are therefore unable to explain the evolution of open dissipative systems. The important points necessary for improving the modeling and simulations of complex chemical systems are: a) understanding the physical potential related to the entropy production rate, which is in general an inexact differential of a state function, and b) the interpretation and application of the so‐called general evolution criterion (GEC), which is the general thermodynamic constraint for the evolution of dissipative chemical systems. John Wiley and Sons Inc. 2021-08-05 2021-09-15 /pmc/articles/PMC8518807/ /pubmed/34259350 http://dx.doi.org/10.1002/chem.202101562 Text en © 2021 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Concepts Ribó, Josep M. Hochberg, David The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity |
title | The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity |
title_full | The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity |
title_fullStr | The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity |
title_full_unstemmed | The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity |
title_short | The Coordinate Reaction Model: An Obstacle to Interpreting the Emergence of Chemical Complexity |
title_sort | coordinate reaction model: an obstacle to interpreting the emergence of chemical complexity |
topic | Concepts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8518807/ https://www.ncbi.nlm.nih.gov/pubmed/34259350 http://dx.doi.org/10.1002/chem.202101562 |
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