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Globaltest confidence regions and their application to ridge regression
We construct confidence regions in high dimensions by inverting the globaltest statistics, and use them to choose the tuning parameter for penalized regression. The selected model corresponds to the point in the confidence region of the parameters that minimizes the penalty, making it the least comp...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8519024/ https://www.ncbi.nlm.nih.gov/pubmed/34046931 http://dx.doi.org/10.1002/bimj.202000063 |
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author | Xu, Ningning Solari, Aldo Goeman, Jelle |
author_facet | Xu, Ningning Solari, Aldo Goeman, Jelle |
author_sort | Xu, Ningning |
collection | PubMed |
description | We construct confidence regions in high dimensions by inverting the globaltest statistics, and use them to choose the tuning parameter for penalized regression. The selected model corresponds to the point in the confidence region of the parameters that minimizes the penalty, making it the least complex model that still has acceptable fit according to the test that defines the confidence region. As the globaltest is particularly powerful in the presence of many weak predictors, it connects well to ridge regression, and we thus focus on ridge penalties in this paper. The confidence region method is quick to calculate, intuitive, and gives decent predictive potential. As a tuning parameter selection method it may even outperform classical methods such as cross‐validation in terms of mean squared error of prediction, especially when the signal is weak. We illustrate the method for linear models in simulation study and for Cox models in real gene expression data of breast cancer samples. |
format | Online Article Text |
id | pubmed-8519024 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85190242021-10-21 Globaltest confidence regions and their application to ridge regression Xu, Ningning Solari, Aldo Goeman, Jelle Biom J High‐dimensional or Clustered Data We construct confidence regions in high dimensions by inverting the globaltest statistics, and use them to choose the tuning parameter for penalized regression. The selected model corresponds to the point in the confidence region of the parameters that minimizes the penalty, making it the least complex model that still has acceptable fit according to the test that defines the confidence region. As the globaltest is particularly powerful in the presence of many weak predictors, it connects well to ridge regression, and we thus focus on ridge penalties in this paper. The confidence region method is quick to calculate, intuitive, and gives decent predictive potential. As a tuning parameter selection method it may even outperform classical methods such as cross‐validation in terms of mean squared error of prediction, especially when the signal is weak. We illustrate the method for linear models in simulation study and for Cox models in real gene expression data of breast cancer samples. John Wiley and Sons Inc. 2021-05-27 2021-10 /pmc/articles/PMC8519024/ /pubmed/34046931 http://dx.doi.org/10.1002/bimj.202000063 Text en © 2021 The Authors. Biometrical Journal published by Wiley‐VCH GmbH. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | High‐dimensional or Clustered Data Xu, Ningning Solari, Aldo Goeman, Jelle Globaltest confidence regions and their application to ridge regression |
title | Globaltest confidence regions and their application to ridge regression |
title_full | Globaltest confidence regions and their application to ridge regression |
title_fullStr | Globaltest confidence regions and their application to ridge regression |
title_full_unstemmed | Globaltest confidence regions and their application to ridge regression |
title_short | Globaltest confidence regions and their application to ridge regression |
title_sort | globaltest confidence regions and their application to ridge regression |
topic | High‐dimensional or Clustered Data |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8519024/ https://www.ncbi.nlm.nih.gov/pubmed/34046931 http://dx.doi.org/10.1002/bimj.202000063 |
work_keys_str_mv | AT xuningning globaltestconfidenceregionsandtheirapplicationtoridgeregression AT solarialdo globaltestconfidenceregionsandtheirapplicationtoridgeregression AT goemanjelle globaltestconfidenceregionsandtheirapplicationtoridgeregression |