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Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea
Scrophularia species are highly valued and widely used traditional medicinal plants in East Asia. In this article, the complete chloroplast genome of Scrophularia cephalantha, a species endemic to South Korea, is reported for the first time. The genome is 153,016 bp long, and it is composed of a pai...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8519515/ https://www.ncbi.nlm.nih.gov/pubmed/34660895 http://dx.doi.org/10.1080/23802359.2021.1925986 |
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author | Jang, Hyun-Do Nam, Gi-Heum Park, Min-Su Jun, Jumin |
author_facet | Jang, Hyun-Do Nam, Gi-Heum Park, Min-Su Jun, Jumin |
author_sort | Jang, Hyun-Do |
collection | PubMed |
description | Scrophularia species are highly valued and widely used traditional medicinal plants in East Asia. In this article, the complete chloroplast genome of Scrophularia cephalantha, a species endemic to South Korea, is reported for the first time. The genome is 153,016 bp long, and it is composed of a pair of 25,485 bp inverted repeats (IRs), separated by a large single copy (LSC) region of 84,124 bp, and a small single copy (SSC) region of 17,922 bp. There are 133 predicted genes in the genome, comprising 88 protein-coding genes, 37 tRNAs, and 8 rRNAs, with an overall GC content of 38%. Phylogenetic analysis based on the chloroplast genome data showed that S. cephalantha is a sister species to S. buergeriana and S. ningpoensis. The data provide useful molecular information for phylogenetic and evolutionary studies of the genus Scrophularia and its related species. |
format | Online Article Text |
id | pubmed-8519515 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-85195152021-10-16 Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea Jang, Hyun-Do Nam, Gi-Heum Park, Min-Su Jun, Jumin Mitochondrial DNA B Resour Mitogenome Announcement Scrophularia species are highly valued and widely used traditional medicinal plants in East Asia. In this article, the complete chloroplast genome of Scrophularia cephalantha, a species endemic to South Korea, is reported for the first time. The genome is 153,016 bp long, and it is composed of a pair of 25,485 bp inverted repeats (IRs), separated by a large single copy (LSC) region of 84,124 bp, and a small single copy (SSC) region of 17,922 bp. There are 133 predicted genes in the genome, comprising 88 protein-coding genes, 37 tRNAs, and 8 rRNAs, with an overall GC content of 38%. Phylogenetic analysis based on the chloroplast genome data showed that S. cephalantha is a sister species to S. buergeriana and S. ningpoensis. The data provide useful molecular information for phylogenetic and evolutionary studies of the genus Scrophularia and its related species. Taylor & Francis 2021-10-12 /pmc/articles/PMC8519515/ /pubmed/34660895 http://dx.doi.org/10.1080/23802359.2021.1925986 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Jang, Hyun-Do Nam, Gi-Heum Park, Min-Su Jun, Jumin Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea |
title | Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea |
title_full | Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea |
title_fullStr | Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea |
title_full_unstemmed | Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea |
title_short | Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea |
title_sort | characterization of the complete chloroplast genome of scrophularia cephalantha endemic to korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8519515/ https://www.ncbi.nlm.nih.gov/pubmed/34660895 http://dx.doi.org/10.1080/23802359.2021.1925986 |
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