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SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity

The adenosine 5′-triphosphate (ATP)–dependent chromatin remodeler SMARCAD1 acts on nucleosomes during DNA replication, repair, and transcription, but despite its implication in disease, information on its function and biochemical activities is scarce. Chromatin remodelers use the energy of ATP hydro...

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Detalles Bibliográficos
Autores principales: Markert, Jonathan, Zhou, Keda, Luger, Karolin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8519567/
https://www.ncbi.nlm.nih.gov/pubmed/34652950
http://dx.doi.org/10.1126/sciadv.abk2380
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author Markert, Jonathan
Zhou, Keda
Luger, Karolin
author_facet Markert, Jonathan
Zhou, Keda
Luger, Karolin
author_sort Markert, Jonathan
collection PubMed
description The adenosine 5′-triphosphate (ATP)–dependent chromatin remodeler SMARCAD1 acts on nucleosomes during DNA replication, repair, and transcription, but despite its implication in disease, information on its function and biochemical activities is scarce. Chromatin remodelers use the energy of ATP hydrolysis to slide nucleosomes, evict histones, or exchange histone variants. Here, we show that SMARCAD1 transfers the entire histone octamer from one DNA segment to another in an ATP-dependent manner but is also capable of de novo nucleosome assembly from histone octamer because of its ability to simultaneously bind all histones. We present a low-resolution cryo–electron microscopy structure of SMARCAD1 in complex with a nucleosome and show that the adenosine triphosphatase domains engage their substrate unlike any other chromatin remodeler. Our biochemical and structural data provide mechanistic insights into SMARCAD1-induced nucleosome disassembly and reassembly.
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spelling pubmed-85195672021-10-26 SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity Markert, Jonathan Zhou, Keda Luger, Karolin Sci Adv Biomedicine and Life Sciences The adenosine 5′-triphosphate (ATP)–dependent chromatin remodeler SMARCAD1 acts on nucleosomes during DNA replication, repair, and transcription, but despite its implication in disease, information on its function and biochemical activities is scarce. Chromatin remodelers use the energy of ATP hydrolysis to slide nucleosomes, evict histones, or exchange histone variants. Here, we show that SMARCAD1 transfers the entire histone octamer from one DNA segment to another in an ATP-dependent manner but is also capable of de novo nucleosome assembly from histone octamer because of its ability to simultaneously bind all histones. We present a low-resolution cryo–electron microscopy structure of SMARCAD1 in complex with a nucleosome and show that the adenosine triphosphatase domains engage their substrate unlike any other chromatin remodeler. Our biochemical and structural data provide mechanistic insights into SMARCAD1-induced nucleosome disassembly and reassembly. American Association for the Advancement of Science 2021-10-15 /pmc/articles/PMC8519567/ /pubmed/34652950 http://dx.doi.org/10.1126/sciadv.abk2380 Text en Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (https://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Biomedicine and Life Sciences
Markert, Jonathan
Zhou, Keda
Luger, Karolin
SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity
title SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity
title_full SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity
title_fullStr SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity
title_full_unstemmed SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity
title_short SMARCAD1 is an ATP-dependent histone octamer exchange factor with de novo nucleosome assembly activity
title_sort smarcad1 is an atp-dependent histone octamer exchange factor with de novo nucleosome assembly activity
topic Biomedicine and Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8519567/
https://www.ncbi.nlm.nih.gov/pubmed/34652950
http://dx.doi.org/10.1126/sciadv.abk2380
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