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Association between risk of brucellosis and genetic variations in MicroRNA-146a

BACKGROUND: Single nucleotide polymorphisms (SNPs) are the most common types of DNA changes in the human genome that leading to phenotypic differences in humans. MicroRNAs (miRNAs) are usually affected by various bacterial infections, and they are involved in controlling the immune responses. MicroR...

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Autores principales: Kazemi, Sima, Afshar, Saeid, Karami, Manoochehr, Saidijam, Massoud, Keramat, Fariba, Hashemi, Seyed Hamid, Alikhani, Mohammad Yousef
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8520608/
https://www.ncbi.nlm.nih.gov/pubmed/34656082
http://dx.doi.org/10.1186/s12879-021-06775-4
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author Kazemi, Sima
Afshar, Saeid
Karami, Manoochehr
Saidijam, Massoud
Keramat, Fariba
Hashemi, Seyed Hamid
Alikhani, Mohammad Yousef
author_facet Kazemi, Sima
Afshar, Saeid
Karami, Manoochehr
Saidijam, Massoud
Keramat, Fariba
Hashemi, Seyed Hamid
Alikhani, Mohammad Yousef
author_sort Kazemi, Sima
collection PubMed
description BACKGROUND: Single nucleotide polymorphisms (SNPs) are the most common types of DNA changes in the human genome that leading to phenotypic differences in humans. MicroRNAs (miRNAs) are usually affected by various bacterial infections, and they are involved in controlling the immune responses. MicroRNA-146a (miR-146a) plays an essential role in the development of infectious and inflammatory diseases. The aim of the present study was to investigate the association between risk of brucellosis and genetic variations in miR-146a. METHODS: This case–control study was conducted on 108 Brucellosis patients and 108 healthy controls. We genotyped two SNPs (rs2910164 and rs57095329) of the miR-146a using tetra-primer amplification refractory mutation system-polymerase chain reaction (T-ARMS-PCR) and restriction fragment length polymorphism-polymerase chain reaction (RFLP-PCR) methods. RESULTS: The rs2910164 SNP was significantly associated with brucellosis in co-dominant [OR = 4.27, 95% CI = (2.35–7.79, P = 0.001] and dominant [OR = 3.52, 95% CI = (1.97–6.30, P = 0.001] models. Co-dominant (P = 0.047) and recessive (P = 0.018) models were significant at position rs57095329 between the two groups of patient and healthy. The A C haplotype (rs2910164 and rs57095329) was associated with brucellosis in the assessed population [OR (95% CI) = 1.98 (1.22–3.20), P = 0.0059]. CONCLUSIONS: Consequently, our study demonstrated significant differences in genotype and haplotype frequencies of miR-146a variants between brucellosis patients and controls. Further studies on the larger sample sizes are required to verify the observed associations.
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spelling pubmed-85206082021-10-20 Association between risk of brucellosis and genetic variations in MicroRNA-146a Kazemi, Sima Afshar, Saeid Karami, Manoochehr Saidijam, Massoud Keramat, Fariba Hashemi, Seyed Hamid Alikhani, Mohammad Yousef BMC Infect Dis Research BACKGROUND: Single nucleotide polymorphisms (SNPs) are the most common types of DNA changes in the human genome that leading to phenotypic differences in humans. MicroRNAs (miRNAs) are usually affected by various bacterial infections, and they are involved in controlling the immune responses. MicroRNA-146a (miR-146a) plays an essential role in the development of infectious and inflammatory diseases. The aim of the present study was to investigate the association between risk of brucellosis and genetic variations in miR-146a. METHODS: This case–control study was conducted on 108 Brucellosis patients and 108 healthy controls. We genotyped two SNPs (rs2910164 and rs57095329) of the miR-146a using tetra-primer amplification refractory mutation system-polymerase chain reaction (T-ARMS-PCR) and restriction fragment length polymorphism-polymerase chain reaction (RFLP-PCR) methods. RESULTS: The rs2910164 SNP was significantly associated with brucellosis in co-dominant [OR = 4.27, 95% CI = (2.35–7.79, P = 0.001] and dominant [OR = 3.52, 95% CI = (1.97–6.30, P = 0.001] models. Co-dominant (P = 0.047) and recessive (P = 0.018) models were significant at position rs57095329 between the two groups of patient and healthy. The A C haplotype (rs2910164 and rs57095329) was associated with brucellosis in the assessed population [OR (95% CI) = 1.98 (1.22–3.20), P = 0.0059]. CONCLUSIONS: Consequently, our study demonstrated significant differences in genotype and haplotype frequencies of miR-146a variants between brucellosis patients and controls. Further studies on the larger sample sizes are required to verify the observed associations. BioMed Central 2021-10-16 /pmc/articles/PMC8520608/ /pubmed/34656082 http://dx.doi.org/10.1186/s12879-021-06775-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Kazemi, Sima
Afshar, Saeid
Karami, Manoochehr
Saidijam, Massoud
Keramat, Fariba
Hashemi, Seyed Hamid
Alikhani, Mohammad Yousef
Association between risk of brucellosis and genetic variations in MicroRNA-146a
title Association between risk of brucellosis and genetic variations in MicroRNA-146a
title_full Association between risk of brucellosis and genetic variations in MicroRNA-146a
title_fullStr Association between risk of brucellosis and genetic variations in MicroRNA-146a
title_full_unstemmed Association between risk of brucellosis and genetic variations in MicroRNA-146a
title_short Association between risk of brucellosis and genetic variations in MicroRNA-146a
title_sort association between risk of brucellosis and genetic variations in microrna-146a
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8520608/
https://www.ncbi.nlm.nih.gov/pubmed/34656082
http://dx.doi.org/10.1186/s12879-021-06775-4
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