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Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis

The bark beetle, Scolytus schevyrewi (S. schevyrewi), is an economically important pest in China that causes serious damage to the fruit industry, particularly, in Xinjiang Province. Chemical signals play an important role in the behavior of most insects, accordingly, ecofriendly traps can be used t...

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Autores principales: Zhu, Xiaofeng, Xu, Bingqiang, Qin, Zhenjie, Kader, Abudukyoum, Song, Bo, Chen, Haoyu, Liu, Yang, Liu, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8521011/
https://www.ncbi.nlm.nih.gov/pubmed/34671270
http://dx.doi.org/10.3389/fphys.2021.717698
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author Zhu, Xiaofeng
Xu, Bingqiang
Qin, Zhenjie
Kader, Abudukyoum
Song, Bo
Chen, Haoyu
Liu, Yang
Liu, Wei
author_facet Zhu, Xiaofeng
Xu, Bingqiang
Qin, Zhenjie
Kader, Abudukyoum
Song, Bo
Chen, Haoyu
Liu, Yang
Liu, Wei
author_sort Zhu, Xiaofeng
collection PubMed
description The bark beetle, Scolytus schevyrewi (S. schevyrewi), is an economically important pest in China that causes serious damage to the fruit industry, particularly, in Xinjiang Province. Chemical signals play an important role in the behavior of most insects, accordingly, ecofriendly traps can be used to monitor and control the target pests in agriculture. In order to lay a foundation for future research on chemical communication mechanisms at the molecular level, we generate antennal transcriptome databases for male and female S. schevyrewi using RNA sequencing (RNA-seq) analysis. By assembling and analyzing the adult male and female antennal transcriptomes, we identified 47 odorant receptors (ORs), 22 ionotropic receptors (IRs), 22 odorant-binding proteins (OBPs), and 11 chemosensory proteins (CSPs). Furthermore, expression levels of all the candidate OBPs and CSPs were validated in different tissues of male and female adults by semiquantitative reverse transcription PCR (RT-PCR). ScosOBP2 and ScosOBP18 were highly expressed in female antennae. ScosCSP2, ScosCSP3, and ScosCSP5 were specifically expressed in the antennae of both males and females. These results provide new potential molecular targets to inform and improve future management strategies of S. schevyrewi.
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spelling pubmed-85210112021-10-19 Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis Zhu, Xiaofeng Xu, Bingqiang Qin, Zhenjie Kader, Abudukyoum Song, Bo Chen, Haoyu Liu, Yang Liu, Wei Front Physiol Physiology The bark beetle, Scolytus schevyrewi (S. schevyrewi), is an economically important pest in China that causes serious damage to the fruit industry, particularly, in Xinjiang Province. Chemical signals play an important role in the behavior of most insects, accordingly, ecofriendly traps can be used to monitor and control the target pests in agriculture. In order to lay a foundation for future research on chemical communication mechanisms at the molecular level, we generate antennal transcriptome databases for male and female S. schevyrewi using RNA sequencing (RNA-seq) analysis. By assembling and analyzing the adult male and female antennal transcriptomes, we identified 47 odorant receptors (ORs), 22 ionotropic receptors (IRs), 22 odorant-binding proteins (OBPs), and 11 chemosensory proteins (CSPs). Furthermore, expression levels of all the candidate OBPs and CSPs were validated in different tissues of male and female adults by semiquantitative reverse transcription PCR (RT-PCR). ScosOBP2 and ScosOBP18 were highly expressed in female antennae. ScosCSP2, ScosCSP3, and ScosCSP5 were specifically expressed in the antennae of both males and females. These results provide new potential molecular targets to inform and improve future management strategies of S. schevyrewi. Frontiers Media S.A. 2021-10-04 /pmc/articles/PMC8521011/ /pubmed/34671270 http://dx.doi.org/10.3389/fphys.2021.717698 Text en Copyright © 2021 Zhu, Xu, Qin, Kader, Song, Chen, Liu and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Physiology
Zhu, Xiaofeng
Xu, Bingqiang
Qin, Zhenjie
Kader, Abudukyoum
Song, Bo
Chen, Haoyu
Liu, Yang
Liu, Wei
Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis
title Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis
title_full Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis
title_fullStr Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis
title_full_unstemmed Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis
title_short Identification of Candidate Olfactory Genes in Scolytus schevyrewi Based on Transcriptomic Analysis
title_sort identification of candidate olfactory genes in scolytus schevyrewi based on transcriptomic analysis
topic Physiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8521011/
https://www.ncbi.nlm.nih.gov/pubmed/34671270
http://dx.doi.org/10.3389/fphys.2021.717698
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