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In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets

Since the epidemic began in November 2019, no viable medicine against SARS-CoV-2 has been discovered. The typical medication discovery strategy requires several years of rigorous research and development as well as a significant financial commitment, which is not feasible in the face of the current...

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Autores principales: Mamidala, Estari, Davella, Rakesh, Praveen Kumar, Munipally, Swamy, Satyanarayana, Abhiav, Mruthinti, Ali Kaimkhani, Zahid, Al-Ghanim, K.A., Mahboob, Shahid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8522677/
https://www.ncbi.nlm.nih.gov/pubmed/34690521
http://dx.doi.org/10.1016/j.sjbs.2021.10.023
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author Mamidala, Estari
Davella, Rakesh
Praveen Kumar, Munipally
Swamy, Satyanarayana
Abhiav, Mruthinti
Ali Kaimkhani, Zahid
Al-Ghanim, K.A.
Mahboob, Shahid
author_facet Mamidala, Estari
Davella, Rakesh
Praveen Kumar, Munipally
Swamy, Satyanarayana
Abhiav, Mruthinti
Ali Kaimkhani, Zahid
Al-Ghanim, K.A.
Mahboob, Shahid
author_sort Mamidala, Estari
collection PubMed
description Since the epidemic began in November 2019, no viable medicine against SARS-CoV-2 has been discovered. The typical medication discovery strategy requires several years of rigorous research and development as well as a significant financial commitment, which is not feasible in the face of the current epidemic. Through molecular docking and dynamic simulation studies, we used the FDA-approved drug mezonavir against the most important viral targets, including spike (S) glycoprotein, Transmembrane serine protease 2 (TMPRSS2), RNA-dependent RNA polymerase (RdRp), Main protease (Mpro), human angiotensin-converting enzyme 2 (ACE-2), and furin. These targets are critical for viral replication and infection propagation because they play a key role in replication/transcription and host cell recognition. Molecular docking revealed that the antiviral medication mozenavir showed a stronger affinity for SARS-CoV-2 target proteins than reference medicines in this investigation. We discovered that mozenavir increases the complex's stability and validates the molecular docking findings using molecular dynamics modeling. Furin, a target protein of COVID-19, has a greater binding affinity (-12.04 kcal/mol) than other COVID-19 target proteins, forming different hydrogen bonds and polar and hydrophobic interactions, suggesting that it might be used as an antiviral treatment against SARS-CoV-2. Overall, the present in silico results will be valuable in identifying crucial targets for subsequent experimental investigations that might help combat COVID-19 by blocking the protease furin's proteolytic activity.
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spelling pubmed-85226772021-10-20 In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets Mamidala, Estari Davella, Rakesh Praveen Kumar, Munipally Swamy, Satyanarayana Abhiav, Mruthinti Ali Kaimkhani, Zahid Al-Ghanim, K.A. Mahboob, Shahid Saudi J Biol Sci Original Article Since the epidemic began in November 2019, no viable medicine against SARS-CoV-2 has been discovered. The typical medication discovery strategy requires several years of rigorous research and development as well as a significant financial commitment, which is not feasible in the face of the current epidemic. Through molecular docking and dynamic simulation studies, we used the FDA-approved drug mezonavir against the most important viral targets, including spike (S) glycoprotein, Transmembrane serine protease 2 (TMPRSS2), RNA-dependent RNA polymerase (RdRp), Main protease (Mpro), human angiotensin-converting enzyme 2 (ACE-2), and furin. These targets are critical for viral replication and infection propagation because they play a key role in replication/transcription and host cell recognition. Molecular docking revealed that the antiviral medication mozenavir showed a stronger affinity for SARS-CoV-2 target proteins than reference medicines in this investigation. We discovered that mozenavir increases the complex's stability and validates the molecular docking findings using molecular dynamics modeling. Furin, a target protein of COVID-19, has a greater binding affinity (-12.04 kcal/mol) than other COVID-19 target proteins, forming different hydrogen bonds and polar and hydrophobic interactions, suggesting that it might be used as an antiviral treatment against SARS-CoV-2. Overall, the present in silico results will be valuable in identifying crucial targets for subsequent experimental investigations that might help combat COVID-19 by blocking the protease furin's proteolytic activity. Elsevier 2022-02 2021-10-18 /pmc/articles/PMC8522677/ /pubmed/34690521 http://dx.doi.org/10.1016/j.sjbs.2021.10.023 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Mamidala, Estari
Davella, Rakesh
Praveen Kumar, Munipally
Swamy, Satyanarayana
Abhiav, Mruthinti
Ali Kaimkhani, Zahid
Al-Ghanim, K.A.
Mahboob, Shahid
In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets
title In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets
title_full In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets
title_fullStr In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets
title_full_unstemmed In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets
title_short In silico prediction of mozenavir as a potential drug for SARS-CoV-2 infection via binding multiple drug targets
title_sort in silico prediction of mozenavir as a potential drug for sars-cov-2 infection via binding multiple drug targets
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8522677/
https://www.ncbi.nlm.nih.gov/pubmed/34690521
http://dx.doi.org/10.1016/j.sjbs.2021.10.023
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