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Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia

OBJECTIVE: Sarcopenia is a universal problem in elderly individuals. The molecular regulatory mechanisms in sarcopenia are not well understood. In the present study, we explored a possible molecular mechanism involved in the pathogenesis of sarcopenia. METHODS: Differentially expressed genes (DEGs)...

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Autores principales: An, Li, Wang, Yao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8523505/
https://www.ncbi.nlm.nih.gov/pubmed/34703286
http://dx.doi.org/10.2147/IJGM.S334501
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author An, Li
Wang, Yao
author_facet An, Li
Wang, Yao
author_sort An, Li
collection PubMed
description OBJECTIVE: Sarcopenia is a universal problem in elderly individuals. The molecular regulatory mechanisms in sarcopenia are not well understood. In the present study, we explored a possible molecular mechanism involved in the pathogenesis of sarcopenia. METHODS: Differentially expressed genes (DEGs) were identified using the Gene Expression Omnibus (GEO) database. Signaling pathways related to these DEGs were identified by gene set enrichment analysis (GSEA). Pearson correlation was calculated for all the pairwise comparisons of gene expression values between coding genes and DEGs. Interactions between the proteins encoded by the DEGs were identified using the STRING database. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses were performed to predict the functions of the DEGs. RESULTS: Three differentially expressed miRNAs and 5 differentially expressed mRNAs were identified in association with DEGs. We found that miRNA-1245a expression in patients with sarcopenia was higher than that in healthy controls. The GSEA showed that many pathways, such as the JAK-STAT signaling pathway and pathways related to glioma, gap junctions, and regulation of the actin cytoskeleton, were enriched in the high-miRNA-1245a-expression group. A total of 127 miRNA-1245a-related mRNAs were identified. The GO and KEGG analyses revealed that miRNA-1245a had a strong effect on a number of fundamental biological processes, such as kinase activity, that are related to the development of sarcopenia. CONCLUSION: Our analyses indicate that miRNA-1245a may be a potential key molecule in the diagnosis and treatment of sarcopenia, which provides a basis for the research of miRNA in sarcopenia.
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spelling pubmed-85235052021-10-25 Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia An, Li Wang, Yao Int J Gen Med Original Research OBJECTIVE: Sarcopenia is a universal problem in elderly individuals. The molecular regulatory mechanisms in sarcopenia are not well understood. In the present study, we explored a possible molecular mechanism involved in the pathogenesis of sarcopenia. METHODS: Differentially expressed genes (DEGs) were identified using the Gene Expression Omnibus (GEO) database. Signaling pathways related to these DEGs were identified by gene set enrichment analysis (GSEA). Pearson correlation was calculated for all the pairwise comparisons of gene expression values between coding genes and DEGs. Interactions between the proteins encoded by the DEGs were identified using the STRING database. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses were performed to predict the functions of the DEGs. RESULTS: Three differentially expressed miRNAs and 5 differentially expressed mRNAs were identified in association with DEGs. We found that miRNA-1245a expression in patients with sarcopenia was higher than that in healthy controls. The GSEA showed that many pathways, such as the JAK-STAT signaling pathway and pathways related to glioma, gap junctions, and regulation of the actin cytoskeleton, were enriched in the high-miRNA-1245a-expression group. A total of 127 miRNA-1245a-related mRNAs were identified. The GO and KEGG analyses revealed that miRNA-1245a had a strong effect on a number of fundamental biological processes, such as kinase activity, that are related to the development of sarcopenia. CONCLUSION: Our analyses indicate that miRNA-1245a may be a potential key molecule in the diagnosis and treatment of sarcopenia, which provides a basis for the research of miRNA in sarcopenia. Dove 2021-10-14 /pmc/articles/PMC8523505/ /pubmed/34703286 http://dx.doi.org/10.2147/IJGM.S334501 Text en © 2021 An and Wang. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
An, Li
Wang, Yao
Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia
title Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia
title_full Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia
title_fullStr Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia
title_full_unstemmed Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia
title_short Potential Roles of miRNA-1245a Regulatory Networks in Sarcopenia
title_sort potential roles of mirna-1245a regulatory networks in sarcopenia
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8523505/
https://www.ncbi.nlm.nih.gov/pubmed/34703286
http://dx.doi.org/10.2147/IJGM.S334501
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