The complete chloroplast genome of Tripsacum laxum (Gramineae)

Tripsacum laxum (Guatemalan grass) is a perennial fodder grasses, which is commonly growing in large parts of Africa for a source of livestock feed. It has a high economic value as a forage. In this study, we obtained a complete chloroplast genome of T. laxum by Illumina sequencing. The results show...

Descripción completa

Detalles Bibliográficos
Autores principales: Luo, Lin, Lin, Hui, Luo, Hai-lin, Li, Qiao-qi, Lin, Dong-mei, Lu, Guo-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8525997/
https://www.ncbi.nlm.nih.gov/pubmed/34676291
http://dx.doi.org/10.1080/23802359.2021.1899872
_version_ 1784585788784115712
author Luo, Lin
Lin, Hui
Luo, Hai-lin
Li, Qiao-qi
Lin, Dong-mei
Lu, Guo-Dong
author_facet Luo, Lin
Lin, Hui
Luo, Hai-lin
Li, Qiao-qi
Lin, Dong-mei
Lu, Guo-Dong
author_sort Luo, Lin
collection PubMed
description Tripsacum laxum (Guatemalan grass) is a perennial fodder grasses, which is commonly growing in large parts of Africa for a source of livestock feed. It has a high economic value as a forage. In this study, we obtained a complete chloroplast genome of T. laxum by Illumina sequencing. The results showed a circular genome of 140,556 bp, including the large single copy region (LSC, 82,939 bp), the small single-copy region (SSC, 12,573 bp), and a pair of 22,522 bp inverted repeat regions (IRs). The circular genome contained 120 genes, including 74 protein-coding genes, eight ribosomal RNA genes and 38 tRNA genes. Evolutionary relationship analysis indicates that T. laxum is more closely related to previously reported T. dactyloides.
format Online
Article
Text
id pubmed-8525997
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-85259972021-10-20 The complete chloroplast genome of Tripsacum laxum (Gramineae) Luo, Lin Lin, Hui Luo, Hai-lin Li, Qiao-qi Lin, Dong-mei Lu, Guo-Dong Mitochondrial DNA B Resour Mitogenome Announcement Tripsacum laxum (Guatemalan grass) is a perennial fodder grasses, which is commonly growing in large parts of Africa for a source of livestock feed. It has a high economic value as a forage. In this study, we obtained a complete chloroplast genome of T. laxum by Illumina sequencing. The results showed a circular genome of 140,556 bp, including the large single copy region (LSC, 82,939 bp), the small single-copy region (SSC, 12,573 bp), and a pair of 22,522 bp inverted repeat regions (IRs). The circular genome contained 120 genes, including 74 protein-coding genes, eight ribosomal RNA genes and 38 tRNA genes. Evolutionary relationship analysis indicates that T. laxum is more closely related to previously reported T. dactyloides. Taylor & Francis 2021-10-15 /pmc/articles/PMC8525997/ /pubmed/34676291 http://dx.doi.org/10.1080/23802359.2021.1899872 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Luo, Lin
Lin, Hui
Luo, Hai-lin
Li, Qiao-qi
Lin, Dong-mei
Lu, Guo-Dong
The complete chloroplast genome of Tripsacum laxum (Gramineae)
title The complete chloroplast genome of Tripsacum laxum (Gramineae)
title_full The complete chloroplast genome of Tripsacum laxum (Gramineae)
title_fullStr The complete chloroplast genome of Tripsacum laxum (Gramineae)
title_full_unstemmed The complete chloroplast genome of Tripsacum laxum (Gramineae)
title_short The complete chloroplast genome of Tripsacum laxum (Gramineae)
title_sort complete chloroplast genome of tripsacum laxum (gramineae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8525997/
https://www.ncbi.nlm.nih.gov/pubmed/34676291
http://dx.doi.org/10.1080/23802359.2021.1899872
work_keys_str_mv AT luolin thecompletechloroplastgenomeoftripsacumlaxumgramineae
AT linhui thecompletechloroplastgenomeoftripsacumlaxumgramineae
AT luohailin thecompletechloroplastgenomeoftripsacumlaxumgramineae
AT liqiaoqi thecompletechloroplastgenomeoftripsacumlaxumgramineae
AT lindongmei thecompletechloroplastgenomeoftripsacumlaxumgramineae
AT luguodong thecompletechloroplastgenomeoftripsacumlaxumgramineae
AT luolin completechloroplastgenomeoftripsacumlaxumgramineae
AT linhui completechloroplastgenomeoftripsacumlaxumgramineae
AT luohailin completechloroplastgenomeoftripsacumlaxumgramineae
AT liqiaoqi completechloroplastgenomeoftripsacumlaxumgramineae
AT lindongmei completechloroplastgenomeoftripsacumlaxumgramineae
AT luguodong completechloroplastgenomeoftripsacumlaxumgramineae

Ejemplares similares