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Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm
Pediatric Index of Mortality 3 is a validated tool including 11 variables for the assessment of mortality risk in PICU patients. With the recent advances in explainable machine learning algorithms, we aimed to assess feasibility of application of these machine learning models to simplify the Pediatr...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8528230/ https://www.ncbi.nlm.nih.gov/pubmed/34693292 http://dx.doi.org/10.1097/CCE.0000000000000561 |
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author | Baloglu, Orkun Nagy, Matthew Ezetendu, Chidiebere Latifi, Samir Q. Nazha, Aziz |
author_facet | Baloglu, Orkun Nagy, Matthew Ezetendu, Chidiebere Latifi, Samir Q. Nazha, Aziz |
author_sort | Baloglu, Orkun |
collection | PubMed |
description | Pediatric Index of Mortality 3 is a validated tool including 11 variables for the assessment of mortality risk in PICU patients. With the recent advances in explainable machine learning algorithms, we aimed to assess feasibility of application of these machine learning models to simplify the Pediatric Index of Mortality 3 scoring system in order to decrease time and labor required for data collection and entry for Pediatric Index of Mortality 3. DESIGN: Single-center, retrospective cohort study. Data from the Virtual Pediatric Systems for patients admitted to Cleveland Clinic Children`s PICU between January 2008 and December 2019 was obtained. Light Gradient Boosting Machine Regressor (a gradient boosting decision tree algorithm) was used for building the machine learning models. Variable importance was analyzed by SHapley Additive exPlanations. All of the 11 Pediatric Index of Mortality 3 variables were used as input variables in the machine learning models to predict Pediatric Index of Mortality 3 risk of mortality as the outcome variable. Mean absolute error, root mean squared error, and R-squared were calculated for each of the 11 machine learning models as model performance parameters. SETTING: Quaternary children’s hospital. PATIENTS: PICU patients. INTERVENTIONS: None. MEASUREMENTS AND MAIN RESULTS: Five-thousand sixty-eight patients were analyzed. The machine learning models were able to maintain similar predictive error until the number of input variables decreased to four. The machine learning model with five input variables (mechanical ventilation in the first hour of PICU admission, very-high-risk diagnosis, surgical recovery from a noncardiac procedure, low-risk diagnosis, and base excess) produced lowest mean root mean squared error of 1.49 (95% CI, 1.05–1.93) and highest R-squared of 0.73 (95% CI, 0.6–0.86) with mean absolute error of 0.43 (95% CI, 0.35–0.5) among all the 11 machine learning models. CONCLUSIONS: Explainable machine learning methods were feasible in simplifying the Pediatric Index of Mortality 3 scoring system with similar risk of mortality predictions compared to the original Pediatric Index of Mortality 3 model tested in a single-center dataset. |
format | Online Article Text |
id | pubmed-8528230 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-85282302021-10-21 Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm Baloglu, Orkun Nagy, Matthew Ezetendu, Chidiebere Latifi, Samir Q. Nazha, Aziz Crit Care Explor Predictive Modeling Report Pediatric Index of Mortality 3 is a validated tool including 11 variables for the assessment of mortality risk in PICU patients. With the recent advances in explainable machine learning algorithms, we aimed to assess feasibility of application of these machine learning models to simplify the Pediatric Index of Mortality 3 scoring system in order to decrease time and labor required for data collection and entry for Pediatric Index of Mortality 3. DESIGN: Single-center, retrospective cohort study. Data from the Virtual Pediatric Systems for patients admitted to Cleveland Clinic Children`s PICU between January 2008 and December 2019 was obtained. Light Gradient Boosting Machine Regressor (a gradient boosting decision tree algorithm) was used for building the machine learning models. Variable importance was analyzed by SHapley Additive exPlanations. All of the 11 Pediatric Index of Mortality 3 variables were used as input variables in the machine learning models to predict Pediatric Index of Mortality 3 risk of mortality as the outcome variable. Mean absolute error, root mean squared error, and R-squared were calculated for each of the 11 machine learning models as model performance parameters. SETTING: Quaternary children’s hospital. PATIENTS: PICU patients. INTERVENTIONS: None. MEASUREMENTS AND MAIN RESULTS: Five-thousand sixty-eight patients were analyzed. The machine learning models were able to maintain similar predictive error until the number of input variables decreased to four. The machine learning model with five input variables (mechanical ventilation in the first hour of PICU admission, very-high-risk diagnosis, surgical recovery from a noncardiac procedure, low-risk diagnosis, and base excess) produced lowest mean root mean squared error of 1.49 (95% CI, 1.05–1.93) and highest R-squared of 0.73 (95% CI, 0.6–0.86) with mean absolute error of 0.43 (95% CI, 0.35–0.5) among all the 11 machine learning models. CONCLUSIONS: Explainable machine learning methods were feasible in simplifying the Pediatric Index of Mortality 3 scoring system with similar risk of mortality predictions compared to the original Pediatric Index of Mortality 3 model tested in a single-center dataset. Lippincott Williams & Wilkins 2021-10-19 /pmc/articles/PMC8528230/ /pubmed/34693292 http://dx.doi.org/10.1097/CCE.0000000000000561 Text en Copyright © 2021 The Authors. Published by Wolters Kluwer Health, Inc. on behalf of the Society of Critical Care Medicine. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) , where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. |
spellingShingle | Predictive Modeling Report Baloglu, Orkun Nagy, Matthew Ezetendu, Chidiebere Latifi, Samir Q. Nazha, Aziz Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm |
title | Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm |
title_full | Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm |
title_fullStr | Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm |
title_full_unstemmed | Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm |
title_short | Simplified Pediatric Index of Mortality 3 Score by Explainable Machine Learning Algorithm |
title_sort | simplified pediatric index of mortality 3 score by explainable machine learning algorithm |
topic | Predictive Modeling Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8528230/ https://www.ncbi.nlm.nih.gov/pubmed/34693292 http://dx.doi.org/10.1097/CCE.0000000000000561 |
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