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GACDN: generative adversarial feature completion and diagnosis network for COVID-19

BACKGROUND: The outbreak of coronavirus disease 2019 (COVID-19) causes tens of million infection world-wide. Many machine learning methods have been proposed for the computer-aided diagnosis between COVID-19 and community-acquired pneumonia (CAP) from chest computed tomography (CT) images. Most of t...

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Autores principales: Zhu, Qi, Ye, Haizhou, Sun, Liang, Li, Zhongnian, Wang, Ran, Shi, Feng, Shen, Dinggang, Zhang, Daoqiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8529574/
https://www.ncbi.nlm.nih.gov/pubmed/34674660
http://dx.doi.org/10.1186/s12880-021-00681-6
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author Zhu, Qi
Ye, Haizhou
Sun, Liang
Li, Zhongnian
Wang, Ran
Shi, Feng
Shen, Dinggang
Zhang, Daoqiang
author_facet Zhu, Qi
Ye, Haizhou
Sun, Liang
Li, Zhongnian
Wang, Ran
Shi, Feng
Shen, Dinggang
Zhang, Daoqiang
author_sort Zhu, Qi
collection PubMed
description BACKGROUND: The outbreak of coronavirus disease 2019 (COVID-19) causes tens of million infection world-wide. Many machine learning methods have been proposed for the computer-aided diagnosis between COVID-19 and community-acquired pneumonia (CAP) from chest computed tomography (CT) images. Most of these methods utilized the location-specific handcrafted features based on the segmentation results to improve the diagnose performance. However, the prerequisite segmentation step is time-consuming and needs the intervention by lots of expert radiologists, which cannot be achieved in the areas with limited medical resources. METHODS: We propose a generative adversarial feature completion and diagnosis network (GACDN) that simultaneously generates handcrafted features by radiomic counterparts and makes accurate diagnoses based on both original and generated features. Specifically, we first calculate the radiomic features from the CT images. Then, in order to fast obtain the location-specific handcrafted features, we use the proposed GACDN to generate them by its corresponding radiomic features. Finally, we use both radiomic features and location-specific handcrafted features for COVID-19 diagnosis. RESULTS: For the performance of our generated location-specific handcrafted features, the results of four basic classifiers show that it has an average of 3.21% increase in diagnoses accuracy. Besides, the experimental results on COVID-19 dataset show that our proposed method achieved superior performance in COVID-19 vs. community acquired pneumonia (CAP) classification compared with the state-of-the-art methods. CONCLUSIONS: The proposed method significantly improves the diagnoses accuracy of COVID-19 vs. CAP in the condition of incomplete location-specific handcrafted features. Besides, it is also applicable in some regions lacking of expert radiologists and high-performance computing resources.
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spelling pubmed-85295742021-10-21 GACDN: generative adversarial feature completion and diagnosis network for COVID-19 Zhu, Qi Ye, Haizhou Sun, Liang Li, Zhongnian Wang, Ran Shi, Feng Shen, Dinggang Zhang, Daoqiang BMC Med Imaging Research BACKGROUND: The outbreak of coronavirus disease 2019 (COVID-19) causes tens of million infection world-wide. Many machine learning methods have been proposed for the computer-aided diagnosis between COVID-19 and community-acquired pneumonia (CAP) from chest computed tomography (CT) images. Most of these methods utilized the location-specific handcrafted features based on the segmentation results to improve the diagnose performance. However, the prerequisite segmentation step is time-consuming and needs the intervention by lots of expert radiologists, which cannot be achieved in the areas with limited medical resources. METHODS: We propose a generative adversarial feature completion and diagnosis network (GACDN) that simultaneously generates handcrafted features by radiomic counterparts and makes accurate diagnoses based on both original and generated features. Specifically, we first calculate the radiomic features from the CT images. Then, in order to fast obtain the location-specific handcrafted features, we use the proposed GACDN to generate them by its corresponding radiomic features. Finally, we use both radiomic features and location-specific handcrafted features for COVID-19 diagnosis. RESULTS: For the performance of our generated location-specific handcrafted features, the results of four basic classifiers show that it has an average of 3.21% increase in diagnoses accuracy. Besides, the experimental results on COVID-19 dataset show that our proposed method achieved superior performance in COVID-19 vs. community acquired pneumonia (CAP) classification compared with the state-of-the-art methods. CONCLUSIONS: The proposed method significantly improves the diagnoses accuracy of COVID-19 vs. CAP in the condition of incomplete location-specific handcrafted features. Besides, it is also applicable in some regions lacking of expert radiologists and high-performance computing resources. BioMed Central 2021-10-21 /pmc/articles/PMC8529574/ /pubmed/34674660 http://dx.doi.org/10.1186/s12880-021-00681-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Zhu, Qi
Ye, Haizhou
Sun, Liang
Li, Zhongnian
Wang, Ran
Shi, Feng
Shen, Dinggang
Zhang, Daoqiang
GACDN: generative adversarial feature completion and diagnosis network for COVID-19
title GACDN: generative adversarial feature completion and diagnosis network for COVID-19
title_full GACDN: generative adversarial feature completion and diagnosis network for COVID-19
title_fullStr GACDN: generative adversarial feature completion and diagnosis network for COVID-19
title_full_unstemmed GACDN: generative adversarial feature completion and diagnosis network for COVID-19
title_short GACDN: generative adversarial feature completion and diagnosis network for COVID-19
title_sort gacdn: generative adversarial feature completion and diagnosis network for covid-19
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8529574/
https://www.ncbi.nlm.nih.gov/pubmed/34674660
http://dx.doi.org/10.1186/s12880-021-00681-6
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