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The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm

Potentilla sischanensis Bunge ex Lehm. is a widespread perennial herb in north China. The plant has little yellow flowers, and the petioles are white-tomentose and sparsely villous. To determine the chloroplast genome, total genomic DNA was extracted from fresh leaves and sequenced. The complete chl...

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Autores principales: Guo, Yupeng, Yao, Buqing, Da, Wenting, Du, Feichao, Yuan, Mengran, Li, Junqiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8530491/
https://www.ncbi.nlm.nih.gov/pubmed/34693013
http://dx.doi.org/10.1080/23802359.2021.1991244
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author Guo, Yupeng
Yao, Buqing
Da, Wenting
Du, Feichao
Yuan, Mengran
Li, Junqiao
author_facet Guo, Yupeng
Yao, Buqing
Da, Wenting
Du, Feichao
Yuan, Mengran
Li, Junqiao
author_sort Guo, Yupeng
collection PubMed
description Potentilla sischanensis Bunge ex Lehm. is a widespread perennial herb in north China. The plant has little yellow flowers, and the petioles are white-tomentose and sparsely villous. To determine the chloroplast genome, total genomic DNA was extracted from fresh leaves and sequenced. The complete chloroplast genome was assembled and annotated. The chloroplast genome of this plant is a circular form with a length of 156,240 bp, including a large single-copy region (LSC, 85,748 bp), a small single-copy region (SSC, 18,566 bp), and two inverted repeats (IRs, 25,963 bp). A total of 132 genes were predicted, comprising 87 encoded proteins, 8 rRNAs and 37 tRNAs. The evolutionary history indicates that P. sischanensis was grouped within Potentilla and formed a clade with Potentilla chinensis and Potentilla stolonifera with a 100% bootstrap support value. The complete cp genome can serve as a reference for future studies on molecular biology, evolution, population genetics, taxonomy and resource protection.
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spelling pubmed-85304912021-10-22 The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm Guo, Yupeng Yao, Buqing Da, Wenting Du, Feichao Yuan, Mengran Li, Junqiao Mitochondrial DNA B Resour Mitogenome Announcement Potentilla sischanensis Bunge ex Lehm. is a widespread perennial herb in north China. The plant has little yellow flowers, and the petioles are white-tomentose and sparsely villous. To determine the chloroplast genome, total genomic DNA was extracted from fresh leaves and sequenced. The complete chloroplast genome was assembled and annotated. The chloroplast genome of this plant is a circular form with a length of 156,240 bp, including a large single-copy region (LSC, 85,748 bp), a small single-copy region (SSC, 18,566 bp), and two inverted repeats (IRs, 25,963 bp). A total of 132 genes were predicted, comprising 87 encoded proteins, 8 rRNAs and 37 tRNAs. The evolutionary history indicates that P. sischanensis was grouped within Potentilla and formed a clade with Potentilla chinensis and Potentilla stolonifera with a 100% bootstrap support value. The complete cp genome can serve as a reference for future studies on molecular biology, evolution, population genetics, taxonomy and resource protection. Taylor & Francis 2021-10-20 /pmc/articles/PMC8530491/ /pubmed/34693013 http://dx.doi.org/10.1080/23802359.2021.1991244 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Guo, Yupeng
Yao, Buqing
Da, Wenting
Du, Feichao
Yuan, Mengran
Li, Junqiao
The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm
title The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm
title_full The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm
title_fullStr The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm
title_full_unstemmed The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm
title_short The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm
title_sort complete chloroplast genome and phylogenetic analysis of potentilla sischanensis bunge ex lehm
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8530491/
https://www.ncbi.nlm.nih.gov/pubmed/34693013
http://dx.doi.org/10.1080/23802359.2021.1991244
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