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The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm
Potentilla sischanensis Bunge ex Lehm. is a widespread perennial herb in north China. The plant has little yellow flowers, and the petioles are white-tomentose and sparsely villous. To determine the chloroplast genome, total genomic DNA was extracted from fresh leaves and sequenced. The complete chl...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8530491/ https://www.ncbi.nlm.nih.gov/pubmed/34693013 http://dx.doi.org/10.1080/23802359.2021.1991244 |
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author | Guo, Yupeng Yao, Buqing Da, Wenting Du, Feichao Yuan, Mengran Li, Junqiao |
author_facet | Guo, Yupeng Yao, Buqing Da, Wenting Du, Feichao Yuan, Mengran Li, Junqiao |
author_sort | Guo, Yupeng |
collection | PubMed |
description | Potentilla sischanensis Bunge ex Lehm. is a widespread perennial herb in north China. The plant has little yellow flowers, and the petioles are white-tomentose and sparsely villous. To determine the chloroplast genome, total genomic DNA was extracted from fresh leaves and sequenced. The complete chloroplast genome was assembled and annotated. The chloroplast genome of this plant is a circular form with a length of 156,240 bp, including a large single-copy region (LSC, 85,748 bp), a small single-copy region (SSC, 18,566 bp), and two inverted repeats (IRs, 25,963 bp). A total of 132 genes were predicted, comprising 87 encoded proteins, 8 rRNAs and 37 tRNAs. The evolutionary history indicates that P. sischanensis was grouped within Potentilla and formed a clade with Potentilla chinensis and Potentilla stolonifera with a 100% bootstrap support value. The complete cp genome can serve as a reference for future studies on molecular biology, evolution, population genetics, taxonomy and resource protection. |
format | Online Article Text |
id | pubmed-8530491 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-85304912021-10-22 The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm Guo, Yupeng Yao, Buqing Da, Wenting Du, Feichao Yuan, Mengran Li, Junqiao Mitochondrial DNA B Resour Mitogenome Announcement Potentilla sischanensis Bunge ex Lehm. is a widespread perennial herb in north China. The plant has little yellow flowers, and the petioles are white-tomentose and sparsely villous. To determine the chloroplast genome, total genomic DNA was extracted from fresh leaves and sequenced. The complete chloroplast genome was assembled and annotated. The chloroplast genome of this plant is a circular form with a length of 156,240 bp, including a large single-copy region (LSC, 85,748 bp), a small single-copy region (SSC, 18,566 bp), and two inverted repeats (IRs, 25,963 bp). A total of 132 genes were predicted, comprising 87 encoded proteins, 8 rRNAs and 37 tRNAs. The evolutionary history indicates that P. sischanensis was grouped within Potentilla and formed a clade with Potentilla chinensis and Potentilla stolonifera with a 100% bootstrap support value. The complete cp genome can serve as a reference for future studies on molecular biology, evolution, population genetics, taxonomy and resource protection. Taylor & Francis 2021-10-20 /pmc/articles/PMC8530491/ /pubmed/34693013 http://dx.doi.org/10.1080/23802359.2021.1991244 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Guo, Yupeng Yao, Buqing Da, Wenting Du, Feichao Yuan, Mengran Li, Junqiao The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm |
title | The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm |
title_full | The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm |
title_fullStr | The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm |
title_full_unstemmed | The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm |
title_short | The complete chloroplast genome and phylogenetic analysis of Potentilla sischanensis Bunge ex Lehm |
title_sort | complete chloroplast genome and phylogenetic analysis of potentilla sischanensis bunge ex lehm |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8530491/ https://www.ncbi.nlm.nih.gov/pubmed/34693013 http://dx.doi.org/10.1080/23802359.2021.1991244 |
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