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Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients

BACKGROUND: Accurate risk stratification of critically ill patients with coronavirus disease 2019 (COVID-19) is essential for optimizing resource allocation, delivering targeted interventions, and maximizing patient survival probability. Machine learning (ML) techniques are attracting increased inte...

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Autores principales: Montomoli, Jonathan, Romeo, Luca, Moccia, Sara, Bernardini, Michele, Migliorelli, Lucia, Berardini, Daniele, Donati, Abele, Carsetti, Andrea, Bocci, Maria Grazia, Wendel Garcia, Pedro David, Fumeaux, Thierry, Guerci, Philippe, Schüpbach, Reto Andreas, Ince, Can, Frontoni, Emanuele, Hilty, Matthias Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8531027/
https://www.ncbi.nlm.nih.gov/pubmed/36785563
http://dx.doi.org/10.1016/j.jointm.2021.09.002
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author Montomoli, Jonathan
Romeo, Luca
Moccia, Sara
Bernardini, Michele
Migliorelli, Lucia
Berardini, Daniele
Donati, Abele
Carsetti, Andrea
Bocci, Maria Grazia
Wendel Garcia, Pedro David
Fumeaux, Thierry
Guerci, Philippe
Schüpbach, Reto Andreas
Ince, Can
Frontoni, Emanuele
Hilty, Matthias Peter
author_facet Montomoli, Jonathan
Romeo, Luca
Moccia, Sara
Bernardini, Michele
Migliorelli, Lucia
Berardini, Daniele
Donati, Abele
Carsetti, Andrea
Bocci, Maria Grazia
Wendel Garcia, Pedro David
Fumeaux, Thierry
Guerci, Philippe
Schüpbach, Reto Andreas
Ince, Can
Frontoni, Emanuele
Hilty, Matthias Peter
author_sort Montomoli, Jonathan
collection PubMed
description BACKGROUND: Accurate risk stratification of critically ill patients with coronavirus disease 2019 (COVID-19) is essential for optimizing resource allocation, delivering targeted interventions, and maximizing patient survival probability. Machine learning (ML) techniques are attracting increased interest for the development of prediction models as they excel in the analysis of complex signals in data-rich environments such as critical care. METHODS: We retrieved data on patients with COVID-19 admitted to an intensive care unit (ICU) between March and October 2020 from the RIsk Stratification in COVID-19 patients in the Intensive Care Unit (RISC-19-ICU) registry. We applied the Extreme Gradient Boosting (XGBoost) algorithm to the data to predict as a binary outcome the increase or decrease in patients’ Sequential Organ Failure Assessment (SOFA) score on day 5 after ICU admission. The model was iteratively cross-validated in different subsets of the study cohort. RESULTS: The final study population consisted of 675 patients. The XGBoost model correctly predicted a decrease in SOFA score in 320/385 (83%) critically ill COVID-19 patients, and an increase in the score in 210/290 (72%) patients. The area under the mean receiver operating characteristic curve for XGBoost was significantly higher than that for the logistic regression model (0.86 vs. 0.69, P < 0.01 [paired t-test with 95% confidence interval]). CONCLUSIONS: The XGBoost model predicted the change in SOFA score in critically ill COVID-19 patients admitted to the ICU and can guide clinical decision support systems (CDSSs) aimed at optimizing available resources.
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spelling pubmed-85310272021-10-22 Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients Montomoli, Jonathan Romeo, Luca Moccia, Sara Bernardini, Michele Migliorelli, Lucia Berardini, Daniele Donati, Abele Carsetti, Andrea Bocci, Maria Grazia Wendel Garcia, Pedro David Fumeaux, Thierry Guerci, Philippe Schüpbach, Reto Andreas Ince, Can Frontoni, Emanuele Hilty, Matthias Peter J Intensive Med Original Article BACKGROUND: Accurate risk stratification of critically ill patients with coronavirus disease 2019 (COVID-19) is essential for optimizing resource allocation, delivering targeted interventions, and maximizing patient survival probability. Machine learning (ML) techniques are attracting increased interest for the development of prediction models as they excel in the analysis of complex signals in data-rich environments such as critical care. METHODS: We retrieved data on patients with COVID-19 admitted to an intensive care unit (ICU) between March and October 2020 from the RIsk Stratification in COVID-19 patients in the Intensive Care Unit (RISC-19-ICU) registry. We applied the Extreme Gradient Boosting (XGBoost) algorithm to the data to predict as a binary outcome the increase or decrease in patients’ Sequential Organ Failure Assessment (SOFA) score on day 5 after ICU admission. The model was iteratively cross-validated in different subsets of the study cohort. RESULTS: The final study population consisted of 675 patients. The XGBoost model correctly predicted a decrease in SOFA score in 320/385 (83%) critically ill COVID-19 patients, and an increase in the score in 210/290 (72%) patients. The area under the mean receiver operating characteristic curve for XGBoost was significantly higher than that for the logistic regression model (0.86 vs. 0.69, P < 0.01 [paired t-test with 95% confidence interval]). CONCLUSIONS: The XGBoost model predicted the change in SOFA score in critically ill COVID-19 patients admitted to the ICU and can guide clinical decision support systems (CDSSs) aimed at optimizing available resources. Elsevier 2021-10-22 /pmc/articles/PMC8531027/ /pubmed/36785563 http://dx.doi.org/10.1016/j.jointm.2021.09.002 Text en © 2021 Chinese Medical Association. Published by Elsevier B.V. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Montomoli, Jonathan
Romeo, Luca
Moccia, Sara
Bernardini, Michele
Migliorelli, Lucia
Berardini, Daniele
Donati, Abele
Carsetti, Andrea
Bocci, Maria Grazia
Wendel Garcia, Pedro David
Fumeaux, Thierry
Guerci, Philippe
Schüpbach, Reto Andreas
Ince, Can
Frontoni, Emanuele
Hilty, Matthias Peter
Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients
title Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients
title_full Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients
title_fullStr Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients
title_full_unstemmed Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients
title_short Machine learning using the extreme gradient boosting (XGBoost) algorithm predicts 5-day delta of SOFA score at ICU admission in COVID-19 patients
title_sort machine learning using the extreme gradient boosting (xgboost) algorithm predicts 5-day delta of sofa score at icu admission in covid-19 patients
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8531027/
https://www.ncbi.nlm.nih.gov/pubmed/36785563
http://dx.doi.org/10.1016/j.jointm.2021.09.002
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