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The impact of recency and adequacy of historical information on sepsis predictions using machine learning
Sepsis is a major public and global health concern. Every hour of delay in detecting sepsis significantly increases the risk of death, highlighting the importance of accurately predicting sepsis in a timely manner. A growing body of literature has examined developing new or improving the existing ma...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8531301/ https://www.ncbi.nlm.nih.gov/pubmed/34675275 http://dx.doi.org/10.1038/s41598-021-00220-x |
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author | Zargoush, Manaf Sameh, Alireza Javadi, Mahdi Shabani, Siyavash Ghazalbash, Somayeh Perri, Dan |
author_facet | Zargoush, Manaf Sameh, Alireza Javadi, Mahdi Shabani, Siyavash Ghazalbash, Somayeh Perri, Dan |
author_sort | Zargoush, Manaf |
collection | PubMed |
description | Sepsis is a major public and global health concern. Every hour of delay in detecting sepsis significantly increases the risk of death, highlighting the importance of accurately predicting sepsis in a timely manner. A growing body of literature has examined developing new or improving the existing machine learning (ML) approaches for timely and accurate predictions of sepsis. This study contributes to this literature by providing clear insights regarding the role of the recency and adequacy of historical information in predicting sepsis using ML. To this end, we implemented a deep learning model using a bidirectional long short-term memory (BiLSTM) algorithm and compared it with six other ML algorithms based on numerous combinations of the prediction horizons (to capture information recency) and observation windows (to capture information adequacy) using different measures of predictive performance. Our results indicated that the BiLSTM algorithm outperforms all other ML algorithms and provides a great separability of the predicted risk of sepsis among septic versus non-septic patients. Moreover, decreasing the prediction horizon (in favor of information recency) always boosts the predictive performance; however, the impact of expanding the observation window (in favor of information adequacy) depends on the prediction horizon and the purpose of prediction. More specifically, when the prediction is responsive to the positive label (i.e., Sepsis), increasing historical data improves the predictive performance when the prediction horizon is short-moderate. |
format | Online Article Text |
id | pubmed-8531301 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-85313012021-10-22 The impact of recency and adequacy of historical information on sepsis predictions using machine learning Zargoush, Manaf Sameh, Alireza Javadi, Mahdi Shabani, Siyavash Ghazalbash, Somayeh Perri, Dan Sci Rep Article Sepsis is a major public and global health concern. Every hour of delay in detecting sepsis significantly increases the risk of death, highlighting the importance of accurately predicting sepsis in a timely manner. A growing body of literature has examined developing new or improving the existing machine learning (ML) approaches for timely and accurate predictions of sepsis. This study contributes to this literature by providing clear insights regarding the role of the recency and adequacy of historical information in predicting sepsis using ML. To this end, we implemented a deep learning model using a bidirectional long short-term memory (BiLSTM) algorithm and compared it with six other ML algorithms based on numerous combinations of the prediction horizons (to capture information recency) and observation windows (to capture information adequacy) using different measures of predictive performance. Our results indicated that the BiLSTM algorithm outperforms all other ML algorithms and provides a great separability of the predicted risk of sepsis among septic versus non-septic patients. Moreover, decreasing the prediction horizon (in favor of information recency) always boosts the predictive performance; however, the impact of expanding the observation window (in favor of information adequacy) depends on the prediction horizon and the purpose of prediction. More specifically, when the prediction is responsive to the positive label (i.e., Sepsis), increasing historical data improves the predictive performance when the prediction horizon is short-moderate. Nature Publishing Group UK 2021-10-21 /pmc/articles/PMC8531301/ /pubmed/34675275 http://dx.doi.org/10.1038/s41598-021-00220-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zargoush, Manaf Sameh, Alireza Javadi, Mahdi Shabani, Siyavash Ghazalbash, Somayeh Perri, Dan The impact of recency and adequacy of historical information on sepsis predictions using machine learning |
title | The impact of recency and adequacy of historical information on sepsis predictions using machine learning |
title_full | The impact of recency and adequacy of historical information on sepsis predictions using machine learning |
title_fullStr | The impact of recency and adequacy of historical information on sepsis predictions using machine learning |
title_full_unstemmed | The impact of recency and adequacy of historical information on sepsis predictions using machine learning |
title_short | The impact of recency and adequacy of historical information on sepsis predictions using machine learning |
title_sort | impact of recency and adequacy of historical information on sepsis predictions using machine learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8531301/ https://www.ncbi.nlm.nih.gov/pubmed/34675275 http://dx.doi.org/10.1038/s41598-021-00220-x |
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