MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Calling fusion genes from RNA-seq data is well established, but other transcriptional variants are difficult to detect using existing approaches. To identify all types of variants in transcriptomes we developed MINTIE, an integrated pipeline for RNA-seq data. We take a reference-free approach, combi...

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Detalles Bibliográficos
Autores principales: Cmero, Marek, Schmidt, Breon, Majewski, Ian J., Ekert, Paul G., Oshlack, Alicia, Davidson, Nadia M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8532352/
https://www.ncbi.nlm.nih.gov/pubmed/34686194
http://dx.doi.org/10.1186/s13059-021-02507-8

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