Cargando…

Terc Gene Cluster Variants Predict Liver Telomere Length in Mice

Variants in a gene cluster upstream-adjacent to TERC on human chromosome 3, which includes genes APRM, LRRC31, LRRC34 and MYNN, have been associated with telomere length in several human populations. Currently, the mechanism by which variants in the TERC gene cluster influence telomere length in hum...

Descripción completa

Detalles Bibliográficos
Autores principales: Zeid, Dana, Mooney-Leber, Sean, Seemiller, Laurel R., Goldberg, Lisa R., Gould, Thomas J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8533930/
https://www.ncbi.nlm.nih.gov/pubmed/34685603
http://dx.doi.org/10.3390/cells10102623
_version_ 1784587432509833216
author Zeid, Dana
Mooney-Leber, Sean
Seemiller, Laurel R.
Goldberg, Lisa R.
Gould, Thomas J.
author_facet Zeid, Dana
Mooney-Leber, Sean
Seemiller, Laurel R.
Goldberg, Lisa R.
Gould, Thomas J.
author_sort Zeid, Dana
collection PubMed
description Variants in a gene cluster upstream-adjacent to TERC on human chromosome 3, which includes genes APRM, LRRC31, LRRC34 and MYNN, have been associated with telomere length in several human populations. Currently, the mechanism by which variants in the TERC gene cluster influence telomere length in humans is unknown. Given the proximity between the TERC gene cluster and TERC (~0.05 Mb) in humans, it is speculated that cluster variants are in linkage disequilibrium with a TERC causal variant. In mice, the Terc gene/Terc gene cluster are also located on chromosome 3; however, the Terc gene cluster is located distantly downstream of Terc (~60 Mb). Here, we initially aim to investigate the interactions between genotype and nicotine exposure on absolute liver telomere length (aTL) in a panel of eight inbred mouse strains. Although we found no significant impact of nicotine on liver aTL, this first experiment identified candidate single nucleotide polymorphisms (SNPs) in the murine Terc gene cluster (within genes Lrrc31, Lrriq4 and Mynn) co-varying with aTL in our panel. In a second experiment, we tested the association of these Terc gene cluster variants with liver aTL in an independent panel of eight inbred mice selected based on candidate SNP genotype. This supported our initial finding that Terc gene cluster polymorphisms impact aTL in mice, consistent with data in human populations. This provides support for mice as a model for telomere dynamics, especially for studying mechanisms underlying the association between Terc cluster variants and telomere length. Finally, these data suggest that mechanisms independent of linkage disequilibrium between the Terc/TERC gene cluster and the Terc/TERC gene mediate the cluster’s regulation of telomere length.
format Online
Article
Text
id pubmed-8533930
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-85339302021-10-23 Terc Gene Cluster Variants Predict Liver Telomere Length in Mice Zeid, Dana Mooney-Leber, Sean Seemiller, Laurel R. Goldberg, Lisa R. Gould, Thomas J. Cells Article Variants in a gene cluster upstream-adjacent to TERC on human chromosome 3, which includes genes APRM, LRRC31, LRRC34 and MYNN, have been associated with telomere length in several human populations. Currently, the mechanism by which variants in the TERC gene cluster influence telomere length in humans is unknown. Given the proximity between the TERC gene cluster and TERC (~0.05 Mb) in humans, it is speculated that cluster variants are in linkage disequilibrium with a TERC causal variant. In mice, the Terc gene/Terc gene cluster are also located on chromosome 3; however, the Terc gene cluster is located distantly downstream of Terc (~60 Mb). Here, we initially aim to investigate the interactions between genotype and nicotine exposure on absolute liver telomere length (aTL) in a panel of eight inbred mouse strains. Although we found no significant impact of nicotine on liver aTL, this first experiment identified candidate single nucleotide polymorphisms (SNPs) in the murine Terc gene cluster (within genes Lrrc31, Lrriq4 and Mynn) co-varying with aTL in our panel. In a second experiment, we tested the association of these Terc gene cluster variants with liver aTL in an independent panel of eight inbred mice selected based on candidate SNP genotype. This supported our initial finding that Terc gene cluster polymorphisms impact aTL in mice, consistent with data in human populations. This provides support for mice as a model for telomere dynamics, especially for studying mechanisms underlying the association between Terc cluster variants and telomere length. Finally, these data suggest that mechanisms independent of linkage disequilibrium between the Terc/TERC gene cluster and the Terc/TERC gene mediate the cluster’s regulation of telomere length. MDPI 2021-10-01 /pmc/articles/PMC8533930/ /pubmed/34685603 http://dx.doi.org/10.3390/cells10102623 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zeid, Dana
Mooney-Leber, Sean
Seemiller, Laurel R.
Goldberg, Lisa R.
Gould, Thomas J.
Terc Gene Cluster Variants Predict Liver Telomere Length in Mice
title Terc Gene Cluster Variants Predict Liver Telomere Length in Mice
title_full Terc Gene Cluster Variants Predict Liver Telomere Length in Mice
title_fullStr Terc Gene Cluster Variants Predict Liver Telomere Length in Mice
title_full_unstemmed Terc Gene Cluster Variants Predict Liver Telomere Length in Mice
title_short Terc Gene Cluster Variants Predict Liver Telomere Length in Mice
title_sort terc gene cluster variants predict liver telomere length in mice
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8533930/
https://www.ncbi.nlm.nih.gov/pubmed/34685603
http://dx.doi.org/10.3390/cells10102623
work_keys_str_mv AT zeiddana tercgeneclustervariantspredictlivertelomerelengthinmice
AT mooneylebersean tercgeneclustervariantspredictlivertelomerelengthinmice
AT seemillerlaurelr tercgeneclustervariantspredictlivertelomerelengthinmice
AT goldberglisar tercgeneclustervariantspredictlivertelomerelengthinmice
AT gouldthomasj tercgeneclustervariantspredictlivertelomerelengthinmice