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On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques

Medical records contain many terms that are difficult to process. Our aim in this study is to allow visual exploration of the information in medical databases where texts present a large number of syntactic variations and abbreviations by using an interface that facilitates content identification, n...

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Autores principales: Torres Parejo, Úrsula, Campaña, Jesús Roque, Vila, María Amparo, Delgado, Miguel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8534415/
https://www.ncbi.nlm.nih.gov/pubmed/34682000
http://dx.doi.org/10.3390/e23101275
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author Torres Parejo, Úrsula
Campaña, Jesús Roque
Vila, María Amparo
Delgado, Miguel
author_facet Torres Parejo, Úrsula
Campaña, Jesús Roque
Vila, María Amparo
Delgado, Miguel
author_sort Torres Parejo, Úrsula
collection PubMed
description Medical records contain many terms that are difficult to process. Our aim in this study is to allow visual exploration of the information in medical databases where texts present a large number of syntactic variations and abbreviations by using an interface that facilitates content identification, navigation, and information retrieval. We propose the use of multi-term tag clouds as content representation tools and as assistants for browsing and querying tasks. The tag cloud generation is achieved by using a novelty mathematical method that allows related terms to remain grouped together within the tags. To evaluate this proposal, we have carried out a survey over a spanish database with 24,481 records. For this purpose, 23 expert users in the medical field were tasked to test the interface and answer some questions in order to evaluate the generated tag clouds properties. In addition, we obtained a precision of 0.990, a recall of 0.870, and a F1-score of 0.904 in the evaluation of the tag cloud as an information retrieval tool. The main contribution of this approach is that we automatically generate a visual interface over the text capable of capturing the semantics of the information and facilitating access to medical records, obtaining a high degree of satisfaction in the evaluation survey.
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spelling pubmed-85344152021-10-23 On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques Torres Parejo, Úrsula Campaña, Jesús Roque Vila, María Amparo Delgado, Miguel Entropy (Basel) Article Medical records contain many terms that are difficult to process. Our aim in this study is to allow visual exploration of the information in medical databases where texts present a large number of syntactic variations and abbreviations by using an interface that facilitates content identification, navigation, and information retrieval. We propose the use of multi-term tag clouds as content representation tools and as assistants for browsing and querying tasks. The tag cloud generation is achieved by using a novelty mathematical method that allows related terms to remain grouped together within the tags. To evaluate this proposal, we have carried out a survey over a spanish database with 24,481 records. For this purpose, 23 expert users in the medical field were tasked to test the interface and answer some questions in order to evaluate the generated tag clouds properties. In addition, we obtained a precision of 0.990, a recall of 0.870, and a F1-score of 0.904 in the evaluation of the tag cloud as an information retrieval tool. The main contribution of this approach is that we automatically generate a visual interface over the text capable of capturing the semantics of the information and facilitating access to medical records, obtaining a high degree of satisfaction in the evaluation survey. MDPI 2021-09-29 /pmc/articles/PMC8534415/ /pubmed/34682000 http://dx.doi.org/10.3390/e23101275 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Torres Parejo, Úrsula
Campaña, Jesús Roque
Vila, María Amparo
Delgado, Miguel
On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques
title On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques
title_full On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques
title_fullStr On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques
title_full_unstemmed On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques
title_short On Building and Evaluating a Medical Records Exploration Interface Using Text Mining Techniques
title_sort on building and evaluating a medical records exploration interface using text mining techniques
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8534415/
https://www.ncbi.nlm.nih.gov/pubmed/34682000
http://dx.doi.org/10.3390/e23101275
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