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Dynamic Effects in Nucleation of Receptor Clusters

Nucleation theory has been widely applied for the interpretation of critical phenomena in nonequilibrium systems. Ligand-induced receptor clustering is a critical step of cellular activation. Receptor clusters on the cell surface are treated from the nucleation theory point of view. The authors prop...

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Autores principales: Prikhodko, Ivan V., Guria, Georgy Th.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8534492/
https://www.ncbi.nlm.nih.gov/pubmed/34681969
http://dx.doi.org/10.3390/e23101245
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author Prikhodko, Ivan V.
Guria, Georgy Th.
author_facet Prikhodko, Ivan V.
Guria, Georgy Th.
author_sort Prikhodko, Ivan V.
collection PubMed
description Nucleation theory has been widely applied for the interpretation of critical phenomena in nonequilibrium systems. Ligand-induced receptor clustering is a critical step of cellular activation. Receptor clusters on the cell surface are treated from the nucleation theory point of view. The authors propose that the redistribution of energy over the degrees of freedom is crucial for forming each new bond in the growing cluster. The expression for a kinetic barrier for new bond formation in a cluster was obtained. The shape of critical receptor clusters seems to be very important for the clustering on the cell surface. The von Neumann entropy of the graph of bonds is used to determine the influence of the cluster shape on the kinetic barrier. Numerical studies were carried out to assess the dependence of the barrier on the size of the cluster. The asymptotic expression, reflecting the conditions necessary for the formation of receptor clusters, was obtained. Several dynamic effects were found. A slight increase of the ligand mass has been shown to significantly accelerate the nucleation of receptor clusters. The possible meaning of the obtained results for medical applications is discussed.
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spelling pubmed-85344922021-10-23 Dynamic Effects in Nucleation of Receptor Clusters Prikhodko, Ivan V. Guria, Georgy Th. Entropy (Basel) Article Nucleation theory has been widely applied for the interpretation of critical phenomena in nonequilibrium systems. Ligand-induced receptor clustering is a critical step of cellular activation. Receptor clusters on the cell surface are treated from the nucleation theory point of view. The authors propose that the redistribution of energy over the degrees of freedom is crucial for forming each new bond in the growing cluster. The expression for a kinetic barrier for new bond formation in a cluster was obtained. The shape of critical receptor clusters seems to be very important for the clustering on the cell surface. The von Neumann entropy of the graph of bonds is used to determine the influence of the cluster shape on the kinetic barrier. Numerical studies were carried out to assess the dependence of the barrier on the size of the cluster. The asymptotic expression, reflecting the conditions necessary for the formation of receptor clusters, was obtained. Several dynamic effects were found. A slight increase of the ligand mass has been shown to significantly accelerate the nucleation of receptor clusters. The possible meaning of the obtained results for medical applications is discussed. MDPI 2021-09-24 /pmc/articles/PMC8534492/ /pubmed/34681969 http://dx.doi.org/10.3390/e23101245 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Prikhodko, Ivan V.
Guria, Georgy Th.
Dynamic Effects in Nucleation of Receptor Clusters
title Dynamic Effects in Nucleation of Receptor Clusters
title_full Dynamic Effects in Nucleation of Receptor Clusters
title_fullStr Dynamic Effects in Nucleation of Receptor Clusters
title_full_unstemmed Dynamic Effects in Nucleation of Receptor Clusters
title_short Dynamic Effects in Nucleation of Receptor Clusters
title_sort dynamic effects in nucleation of receptor clusters
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8534492/
https://www.ncbi.nlm.nih.gov/pubmed/34681969
http://dx.doi.org/10.3390/e23101245
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