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Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images

As the COVID-19 pandemic continues to ravage the world, the use of chest X-ray (CXR) images as a complementary screening strategy to reverse transcription-polymerase chain reaction (RT-PCR) testing continues to grow owing to its routine clinical application to respiratory diseases. We performed exte...

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Detalles Bibliográficos
Autores principales: Zhao, Wentao, Jiang, Wei, Qiu, Xinguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8535063/
https://www.ncbi.nlm.nih.gov/pubmed/34679585
http://dx.doi.org/10.3390/diagnostics11101887
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author Zhao, Wentao
Jiang, Wei
Qiu, Xinguo
author_facet Zhao, Wentao
Jiang, Wei
Qiu, Xinguo
author_sort Zhao, Wentao
collection PubMed
description As the COVID-19 pandemic continues to ravage the world, the use of chest X-ray (CXR) images as a complementary screening strategy to reverse transcription-polymerase chain reaction (RT-PCR) testing continues to grow owing to its routine clinical application to respiratory diseases. We performed extensive convolutional neural network (CNN) fine-tuning experiments and identified that models pretrained on larger out-of-domain datasets show an improved performance. This suggests that a priori knowledge of models from out-of-field training should also apply to X-ray images. With appropriate hyperparameters selection, we found that higher resolution images carry more clinical information, and the use of mixup in training improved the performance of the model. The experimental showed that our proposed transfer learning present state-of-the-art results. Furthermore, we evaluated the performance of our model with a small amount of downstream training data and found that the model still performed well in COVID-19 identification. We also explored the mechanism of model detection using a gradient-weighted class activation mapping (Grad-CAM) method for CXR imaging to interpret the detection of radiology images. The results helped us understand how the model detects COVID-19, which can be used to discover new visual features and assist radiologists in screening.
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spelling pubmed-85350632021-10-23 Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images Zhao, Wentao Jiang, Wei Qiu, Xinguo Diagnostics (Basel) Article As the COVID-19 pandemic continues to ravage the world, the use of chest X-ray (CXR) images as a complementary screening strategy to reverse transcription-polymerase chain reaction (RT-PCR) testing continues to grow owing to its routine clinical application to respiratory diseases. We performed extensive convolutional neural network (CNN) fine-tuning experiments and identified that models pretrained on larger out-of-domain datasets show an improved performance. This suggests that a priori knowledge of models from out-of-field training should also apply to X-ray images. With appropriate hyperparameters selection, we found that higher resolution images carry more clinical information, and the use of mixup in training improved the performance of the model. The experimental showed that our proposed transfer learning present state-of-the-art results. Furthermore, we evaluated the performance of our model with a small amount of downstream training data and found that the model still performed well in COVID-19 identification. We also explored the mechanism of model detection using a gradient-weighted class activation mapping (Grad-CAM) method for CXR imaging to interpret the detection of radiology images. The results helped us understand how the model detects COVID-19, which can be used to discover new visual features and assist radiologists in screening. MDPI 2021-10-13 /pmc/articles/PMC8535063/ /pubmed/34679585 http://dx.doi.org/10.3390/diagnostics11101887 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhao, Wentao
Jiang, Wei
Qiu, Xinguo
Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images
title Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images
title_full Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images
title_fullStr Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images
title_full_unstemmed Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images
title_short Fine-Tuning Convolutional Neural Networks for COVID-19 Detection from Chest X-ray Images
title_sort fine-tuning convolutional neural networks for covid-19 detection from chest x-ray images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8535063/
https://www.ncbi.nlm.nih.gov/pubmed/34679585
http://dx.doi.org/10.3390/diagnostics11101887
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