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The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis
BACKGROUND: Serine/threonine kinase 3 (AKT3) is a protein-coding gene that is associated with several cattle immune diseases including different tumors and cancers. The objective of this study was to investigate the differences in structures and functions of AKT3 of cow and buffalo cattle. METHODS:...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8536807/ https://www.ncbi.nlm.nih.gov/pubmed/34677734 http://dx.doi.org/10.1186/s43141-021-00258-4 |
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author | Farmanullah, Farmanullah Gouda, Mostafa Min, Zhang Sutong, Xu KaKar, Mohib Ullah Khan, Sami Ullah Salim, Muhammad Khan, Momen Rehman, Zia ur Talpur, Hira Sajjad Khan, Faheem Ahmed Pandupuspitasari, Nuruliarizki Shinta Shujun, Zhang |
author_facet | Farmanullah, Farmanullah Gouda, Mostafa Min, Zhang Sutong, Xu KaKar, Mohib Ullah Khan, Sami Ullah Salim, Muhammad Khan, Momen Rehman, Zia ur Talpur, Hira Sajjad Khan, Faheem Ahmed Pandupuspitasari, Nuruliarizki Shinta Shujun, Zhang |
author_sort | Farmanullah, Farmanullah |
collection | PubMed |
description | BACKGROUND: Serine/threonine kinase 3 (AKT3) is a protein-coding gene that is associated with several cattle immune diseases including different tumors and cancers. The objective of this study was to investigate the differences in structures and functions of AKT3 of cow and buffalo cattle. METHODS: The sequence differences of gene-coding sequence (CDS) and core promoter region of AKT3 in cow and buffalo were analyzed by using bioinformatics tools and PCR sequencing. Also, the functional analysis of promoter regulating gene expression by RT-PCR was performed using 500 Holstein cows and buffalos. And, evaluation of AKT3 inflammatory response to the lipopolysaccharide (LPS)-induced mastitis was performed between both species. RESULTS: The results revealed the variation in 6 exons out of 13 exons of the two species of CDS. Also, 4 different regions in 3-kb promoters of the AKT3 gene were significantly different between cow and buffalo species, in which cow’s AKT3 promoter sequence region was started from − 371 to − 1247, while in buffalo, the sequence was started from − 371 to − 969 of the promoter crucial region. Thus, the promoter was overexpressed in cows compared to buffaloes. As a result, significant differences (P < 0.05) between the two species in the AKT3 gene expression level related to the LPS stimulation in their mammary epithelial cell line. CONCLUSIONS: This study emphasized the great importance of the structural differences of AKT3 between the animal species on their different responses against immune diseases like mastitis. |
format | Online Article Text |
id | pubmed-8536807 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-85368072021-11-04 The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis Farmanullah, Farmanullah Gouda, Mostafa Min, Zhang Sutong, Xu KaKar, Mohib Ullah Khan, Sami Ullah Salim, Muhammad Khan, Momen Rehman, Zia ur Talpur, Hira Sajjad Khan, Faheem Ahmed Pandupuspitasari, Nuruliarizki Shinta Shujun, Zhang J Genet Eng Biotechnol Research BACKGROUND: Serine/threonine kinase 3 (AKT3) is a protein-coding gene that is associated with several cattle immune diseases including different tumors and cancers. The objective of this study was to investigate the differences in structures and functions of AKT3 of cow and buffalo cattle. METHODS: The sequence differences of gene-coding sequence (CDS) and core promoter region of AKT3 in cow and buffalo were analyzed by using bioinformatics tools and PCR sequencing. Also, the functional analysis of promoter regulating gene expression by RT-PCR was performed using 500 Holstein cows and buffalos. And, evaluation of AKT3 inflammatory response to the lipopolysaccharide (LPS)-induced mastitis was performed between both species. RESULTS: The results revealed the variation in 6 exons out of 13 exons of the two species of CDS. Also, 4 different regions in 3-kb promoters of the AKT3 gene were significantly different between cow and buffalo species, in which cow’s AKT3 promoter sequence region was started from − 371 to − 1247, while in buffalo, the sequence was started from − 371 to − 969 of the promoter crucial region. Thus, the promoter was overexpressed in cows compared to buffaloes. As a result, significant differences (P < 0.05) between the two species in the AKT3 gene expression level related to the LPS stimulation in their mammary epithelial cell line. CONCLUSIONS: This study emphasized the great importance of the structural differences of AKT3 between the animal species on their different responses against immune diseases like mastitis. Springer Berlin Heidelberg 2021-10-22 /pmc/articles/PMC8536807/ /pubmed/34677734 http://dx.doi.org/10.1186/s43141-021-00258-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Farmanullah, Farmanullah Gouda, Mostafa Min, Zhang Sutong, Xu KaKar, Mohib Ullah Khan, Sami Ullah Salim, Muhammad Khan, Momen Rehman, Zia ur Talpur, Hira Sajjad Khan, Faheem Ahmed Pandupuspitasari, Nuruliarizki Shinta Shujun, Zhang The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis |
title | The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis |
title_full | The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis |
title_fullStr | The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis |
title_full_unstemmed | The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis |
title_short | The variation in promoter sequences of the Akt3 gene between cow and buffalo revealed different responses against mastitis |
title_sort | variation in promoter sequences of the akt3 gene between cow and buffalo revealed different responses against mastitis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8536807/ https://www.ncbi.nlm.nih.gov/pubmed/34677734 http://dx.doi.org/10.1186/s43141-021-00258-4 |
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