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Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming
The effect of hydrogen bonds around the active site of Anabaena [2Fe-2S] ferredoxin (Fd) on a vertical ionization potential of the reduced state (IP(red)) is examined based on the density functional theory (DFT) calculations. The results indicate that a single hydrogen bond increases the relative st...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538827/ https://www.ncbi.nlm.nih.gov/pubmed/34684710 http://dx.doi.org/10.3390/molecules26206129 |
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author | Era, Iori Kitagawa, Yasutaka Yasuda, Natsumi Kamimura, Taigo Amamizu, Naoka Sato, Hiromasa Cho, Keigo Okumura, Mitsutaka Nakano, Masayoshi |
author_facet | Era, Iori Kitagawa, Yasutaka Yasuda, Natsumi Kamimura, Taigo Amamizu, Naoka Sato, Hiromasa Cho, Keigo Okumura, Mitsutaka Nakano, Masayoshi |
author_sort | Era, Iori |
collection | PubMed |
description | The effect of hydrogen bonds around the active site of Anabaena [2Fe-2S] ferredoxin (Fd) on a vertical ionization potential of the reduced state (IP(red)) is examined based on the density functional theory (DFT) calculations. The results indicate that a single hydrogen bond increases the relative stability of the reduced state, and shifts IP(red) to a reductive side by 0.31–0.33 eV, regardless of the attached sulfur atoms. In addition, the IP(red) value can be changed by the number of hydrogen bonds around the active site. The results also suggest that the redox potential of [2Fe-2S] Fd is controlled by the number of hydrogen bonds because IP(red) is considered to be a major factor in the redox potential. Furthermore, there is a possibility that the redox potentials of artificial iron-sulfur clusters can be finely controlled by the number of the hydrogen bonds attached to the sulfur atoms of the cluster. |
format | Online Article Text |
id | pubmed-8538827 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-85388272021-10-24 Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming Era, Iori Kitagawa, Yasutaka Yasuda, Natsumi Kamimura, Taigo Amamizu, Naoka Sato, Hiromasa Cho, Keigo Okumura, Mitsutaka Nakano, Masayoshi Molecules Article The effect of hydrogen bonds around the active site of Anabaena [2Fe-2S] ferredoxin (Fd) on a vertical ionization potential of the reduced state (IP(red)) is examined based on the density functional theory (DFT) calculations. The results indicate that a single hydrogen bond increases the relative stability of the reduced state, and shifts IP(red) to a reductive side by 0.31–0.33 eV, regardless of the attached sulfur atoms. In addition, the IP(red) value can be changed by the number of hydrogen bonds around the active site. The results also suggest that the redox potential of [2Fe-2S] Fd is controlled by the number of hydrogen bonds because IP(red) is considered to be a major factor in the redox potential. Furthermore, there is a possibility that the redox potentials of artificial iron-sulfur clusters can be finely controlled by the number of the hydrogen bonds attached to the sulfur atoms of the cluster. MDPI 2021-10-11 /pmc/articles/PMC8538827/ /pubmed/34684710 http://dx.doi.org/10.3390/molecules26206129 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Era, Iori Kitagawa, Yasutaka Yasuda, Natsumi Kamimura, Taigo Amamizu, Naoka Sato, Hiromasa Cho, Keigo Okumura, Mitsutaka Nakano, Masayoshi Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming |
title | Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming |
title_full | Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming |
title_fullStr | Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming |
title_full_unstemmed | Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming |
title_short | Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming |
title_sort | theoretical study on redox potential control of iron-sulfur cluster by hydrogen bonds: a possibility of redox potential programming |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538827/ https://www.ncbi.nlm.nih.gov/pubmed/34684710 http://dx.doi.org/10.3390/molecules26206129 |
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