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Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming

The effect of hydrogen bonds around the active site of Anabaena [2Fe-2S] ferredoxin (Fd) on a vertical ionization potential of the reduced state (IP(red)) is examined based on the density functional theory (DFT) calculations. The results indicate that a single hydrogen bond increases the relative st...

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Autores principales: Era, Iori, Kitagawa, Yasutaka, Yasuda, Natsumi, Kamimura, Taigo, Amamizu, Naoka, Sato, Hiromasa, Cho, Keigo, Okumura, Mitsutaka, Nakano, Masayoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538827/
https://www.ncbi.nlm.nih.gov/pubmed/34684710
http://dx.doi.org/10.3390/molecules26206129
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author Era, Iori
Kitagawa, Yasutaka
Yasuda, Natsumi
Kamimura, Taigo
Amamizu, Naoka
Sato, Hiromasa
Cho, Keigo
Okumura, Mitsutaka
Nakano, Masayoshi
author_facet Era, Iori
Kitagawa, Yasutaka
Yasuda, Natsumi
Kamimura, Taigo
Amamizu, Naoka
Sato, Hiromasa
Cho, Keigo
Okumura, Mitsutaka
Nakano, Masayoshi
author_sort Era, Iori
collection PubMed
description The effect of hydrogen bonds around the active site of Anabaena [2Fe-2S] ferredoxin (Fd) on a vertical ionization potential of the reduced state (IP(red)) is examined based on the density functional theory (DFT) calculations. The results indicate that a single hydrogen bond increases the relative stability of the reduced state, and shifts IP(red) to a reductive side by 0.31–0.33 eV, regardless of the attached sulfur atoms. In addition, the IP(red) value can be changed by the number of hydrogen bonds around the active site. The results also suggest that the redox potential of [2Fe-2S] Fd is controlled by the number of hydrogen bonds because IP(red) is considered to be a major factor in the redox potential. Furthermore, there is a possibility that the redox potentials of artificial iron-sulfur clusters can be finely controlled by the number of the hydrogen bonds attached to the sulfur atoms of the cluster.
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spelling pubmed-85388272021-10-24 Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming Era, Iori Kitagawa, Yasutaka Yasuda, Natsumi Kamimura, Taigo Amamizu, Naoka Sato, Hiromasa Cho, Keigo Okumura, Mitsutaka Nakano, Masayoshi Molecules Article The effect of hydrogen bonds around the active site of Anabaena [2Fe-2S] ferredoxin (Fd) on a vertical ionization potential of the reduced state (IP(red)) is examined based on the density functional theory (DFT) calculations. The results indicate that a single hydrogen bond increases the relative stability of the reduced state, and shifts IP(red) to a reductive side by 0.31–0.33 eV, regardless of the attached sulfur atoms. In addition, the IP(red) value can be changed by the number of hydrogen bonds around the active site. The results also suggest that the redox potential of [2Fe-2S] Fd is controlled by the number of hydrogen bonds because IP(red) is considered to be a major factor in the redox potential. Furthermore, there is a possibility that the redox potentials of artificial iron-sulfur clusters can be finely controlled by the number of the hydrogen bonds attached to the sulfur atoms of the cluster. MDPI 2021-10-11 /pmc/articles/PMC8538827/ /pubmed/34684710 http://dx.doi.org/10.3390/molecules26206129 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Era, Iori
Kitagawa, Yasutaka
Yasuda, Natsumi
Kamimura, Taigo
Amamizu, Naoka
Sato, Hiromasa
Cho, Keigo
Okumura, Mitsutaka
Nakano, Masayoshi
Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming
title Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming
title_full Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming
title_fullStr Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming
title_full_unstemmed Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming
title_short Theoretical Study on Redox Potential Control of Iron-Sulfur Cluster by Hydrogen Bonds: A Possibility of Redox Potential Programming
title_sort theoretical study on redox potential control of iron-sulfur cluster by hydrogen bonds: a possibility of redox potential programming
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538827/
https://www.ncbi.nlm.nih.gov/pubmed/34684710
http://dx.doi.org/10.3390/molecules26206129
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