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Weed Classification Using Explainable Multi-Resolution Slot Attention
In agriculture, explainable deep neural networks (DNNs) can be used to pinpoint the discriminative part of weeds for an imagery classification task, albeit at a low resolution, to control the weed population. This paper proposes the use of a multi-layer attention procedure based on a transformer com...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538865/ https://www.ncbi.nlm.nih.gov/pubmed/34695919 http://dx.doi.org/10.3390/s21206705 |
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author | Farkhani, Sadaf Skovsen, Søren Kelstrup Dyrmann, Mads Jørgensen, Rasmus Nyholm Karstoft, Henrik |
author_facet | Farkhani, Sadaf Skovsen, Søren Kelstrup Dyrmann, Mads Jørgensen, Rasmus Nyholm Karstoft, Henrik |
author_sort | Farkhani, Sadaf |
collection | PubMed |
description | In agriculture, explainable deep neural networks (DNNs) can be used to pinpoint the discriminative part of weeds for an imagery classification task, albeit at a low resolution, to control the weed population. This paper proposes the use of a multi-layer attention procedure based on a transformer combined with a fusion rule to present an interpretation of the DNN decision through a high-resolution attention map. The fusion rule is a weighted average method that is used to combine attention maps from different layers based on saliency. Attention maps with an explanation for why a weed is or is not classified as a certain class help agronomists to shape the high-resolution weed identification keys (WIK) that the model perceives. The model is trained and evaluated on two agricultural datasets that contain plants grown under different conditions: the Plant Seedlings Dataset (PSD) and the Open Plant Phenotyping Dataset (OPPD). The model represents attention maps with highlighted requirements and information about misclassification to enable cross-dataset evaluations. State-of-the-art comparisons represent classification developments after applying attention maps. Average accuracies of 95.42% and 96% are gained for the negative and positive explanations of the PSD test sets, respectively. In OPPD evaluations, accuracies of 97.78% and 97.83% are obtained for negative and positive explanations, respectively. The visual comparison between attention maps also shows high-resolution information. |
format | Online Article Text |
id | pubmed-8538865 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-85388652021-10-24 Weed Classification Using Explainable Multi-Resolution Slot Attention Farkhani, Sadaf Skovsen, Søren Kelstrup Dyrmann, Mads Jørgensen, Rasmus Nyholm Karstoft, Henrik Sensors (Basel) Article In agriculture, explainable deep neural networks (DNNs) can be used to pinpoint the discriminative part of weeds for an imagery classification task, albeit at a low resolution, to control the weed population. This paper proposes the use of a multi-layer attention procedure based on a transformer combined with a fusion rule to present an interpretation of the DNN decision through a high-resolution attention map. The fusion rule is a weighted average method that is used to combine attention maps from different layers based on saliency. Attention maps with an explanation for why a weed is or is not classified as a certain class help agronomists to shape the high-resolution weed identification keys (WIK) that the model perceives. The model is trained and evaluated on two agricultural datasets that contain plants grown under different conditions: the Plant Seedlings Dataset (PSD) and the Open Plant Phenotyping Dataset (OPPD). The model represents attention maps with highlighted requirements and information about misclassification to enable cross-dataset evaluations. State-of-the-art comparisons represent classification developments after applying attention maps. Average accuracies of 95.42% and 96% are gained for the negative and positive explanations of the PSD test sets, respectively. In OPPD evaluations, accuracies of 97.78% and 97.83% are obtained for negative and positive explanations, respectively. The visual comparison between attention maps also shows high-resolution information. MDPI 2021-10-09 /pmc/articles/PMC8538865/ /pubmed/34695919 http://dx.doi.org/10.3390/s21206705 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Farkhani, Sadaf Skovsen, Søren Kelstrup Dyrmann, Mads Jørgensen, Rasmus Nyholm Karstoft, Henrik Weed Classification Using Explainable Multi-Resolution Slot Attention |
title | Weed Classification Using Explainable Multi-Resolution Slot Attention |
title_full | Weed Classification Using Explainable Multi-Resolution Slot Attention |
title_fullStr | Weed Classification Using Explainable Multi-Resolution Slot Attention |
title_full_unstemmed | Weed Classification Using Explainable Multi-Resolution Slot Attention |
title_short | Weed Classification Using Explainable Multi-Resolution Slot Attention |
title_sort | weed classification using explainable multi-resolution slot attention |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538865/ https://www.ncbi.nlm.nih.gov/pubmed/34695919 http://dx.doi.org/10.3390/s21206705 |
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