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Weed Classification Using Explainable Multi-Resolution Slot Attention

In agriculture, explainable deep neural networks (DNNs) can be used to pinpoint the discriminative part of weeds for an imagery classification task, albeit at a low resolution, to control the weed population. This paper proposes the use of a multi-layer attention procedure based on a transformer com...

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Autores principales: Farkhani, Sadaf, Skovsen, Søren Kelstrup, Dyrmann, Mads, Jørgensen, Rasmus Nyholm, Karstoft, Henrik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538865/
https://www.ncbi.nlm.nih.gov/pubmed/34695919
http://dx.doi.org/10.3390/s21206705
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author Farkhani, Sadaf
Skovsen, Søren Kelstrup
Dyrmann, Mads
Jørgensen, Rasmus Nyholm
Karstoft, Henrik
author_facet Farkhani, Sadaf
Skovsen, Søren Kelstrup
Dyrmann, Mads
Jørgensen, Rasmus Nyholm
Karstoft, Henrik
author_sort Farkhani, Sadaf
collection PubMed
description In agriculture, explainable deep neural networks (DNNs) can be used to pinpoint the discriminative part of weeds for an imagery classification task, albeit at a low resolution, to control the weed population. This paper proposes the use of a multi-layer attention procedure based on a transformer combined with a fusion rule to present an interpretation of the DNN decision through a high-resolution attention map. The fusion rule is a weighted average method that is used to combine attention maps from different layers based on saliency. Attention maps with an explanation for why a weed is or is not classified as a certain class help agronomists to shape the high-resolution weed identification keys (WIK) that the model perceives. The model is trained and evaluated on two agricultural datasets that contain plants grown under different conditions: the Plant Seedlings Dataset (PSD) and the Open Plant Phenotyping Dataset (OPPD). The model represents attention maps with highlighted requirements and information about misclassification to enable cross-dataset evaluations. State-of-the-art comparisons represent classification developments after applying attention maps. Average accuracies of 95.42% and 96% are gained for the negative and positive explanations of the PSD test sets, respectively. In OPPD evaluations, accuracies of 97.78% and 97.83% are obtained for negative and positive explanations, respectively. The visual comparison between attention maps also shows high-resolution information.
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spelling pubmed-85388652021-10-24 Weed Classification Using Explainable Multi-Resolution Slot Attention Farkhani, Sadaf Skovsen, Søren Kelstrup Dyrmann, Mads Jørgensen, Rasmus Nyholm Karstoft, Henrik Sensors (Basel) Article In agriculture, explainable deep neural networks (DNNs) can be used to pinpoint the discriminative part of weeds for an imagery classification task, albeit at a low resolution, to control the weed population. This paper proposes the use of a multi-layer attention procedure based on a transformer combined with a fusion rule to present an interpretation of the DNN decision through a high-resolution attention map. The fusion rule is a weighted average method that is used to combine attention maps from different layers based on saliency. Attention maps with an explanation for why a weed is or is not classified as a certain class help agronomists to shape the high-resolution weed identification keys (WIK) that the model perceives. The model is trained and evaluated on two agricultural datasets that contain plants grown under different conditions: the Plant Seedlings Dataset (PSD) and the Open Plant Phenotyping Dataset (OPPD). The model represents attention maps with highlighted requirements and information about misclassification to enable cross-dataset evaluations. State-of-the-art comparisons represent classification developments after applying attention maps. Average accuracies of 95.42% and 96% are gained for the negative and positive explanations of the PSD test sets, respectively. In OPPD evaluations, accuracies of 97.78% and 97.83% are obtained for negative and positive explanations, respectively. The visual comparison between attention maps also shows high-resolution information. MDPI 2021-10-09 /pmc/articles/PMC8538865/ /pubmed/34695919 http://dx.doi.org/10.3390/s21206705 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Farkhani, Sadaf
Skovsen, Søren Kelstrup
Dyrmann, Mads
Jørgensen, Rasmus Nyholm
Karstoft, Henrik
Weed Classification Using Explainable Multi-Resolution Slot Attention
title Weed Classification Using Explainable Multi-Resolution Slot Attention
title_full Weed Classification Using Explainable Multi-Resolution Slot Attention
title_fullStr Weed Classification Using Explainable Multi-Resolution Slot Attention
title_full_unstemmed Weed Classification Using Explainable Multi-Resolution Slot Attention
title_short Weed Classification Using Explainable Multi-Resolution Slot Attention
title_sort weed classification using explainable multi-resolution slot attention
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8538865/
https://www.ncbi.nlm.nih.gov/pubmed/34695919
http://dx.doi.org/10.3390/s21206705
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