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Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula

The soil microbiome of the Barents Sea coast of the Kola Peninsula is here characterized for the first time. The content of copies of ribosomal genes of archaea, bacteria, and fungi was determined by real-time PCR. Reserves and structure of biomass of soil microorganisms such as total biomass of fun...

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Autores principales: Korneykova, Maria, Nikitin, Dmitry, Myazin, Vladimir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8539678/
https://www.ncbi.nlm.nih.gov/pubmed/34683447
http://dx.doi.org/10.3390/microorganisms9102126
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author Korneykova, Maria
Nikitin, Dmitry
Myazin, Vladimir
author_facet Korneykova, Maria
Nikitin, Dmitry
Myazin, Vladimir
author_sort Korneykova, Maria
collection PubMed
description The soil microbiome of the Barents Sea coast of the Kola Peninsula is here characterized for the first time. The content of copies of ribosomal genes of archaea, bacteria, and fungi was determined by real-time PCR. Reserves and structure of biomass of soil microorganisms such as total biomass of fungi and prokaryotes, length and diameter of mycelium of fungi and actinomycetes, proportion of mycelium in biomass, number of spores and prokaryotic cells, proportion of small and large fungal propagules, and morphology of mycobiota spores were determined. The largest number of ribosomal gene copies was found for bacteria (from 6.47 × 10(9) to 3.02 × 10(11) per g soil). The number of copies of ribosomal genes of fungi and archaea varied within 10(7)–10(9) copies of genes/g soil. The biomass of microorganisms (prokaryotes and fungi in total) varied from 0.023 to 0.840 mg/g soil. The share of mycobiota in the microbial biomass ranged from 90% to 97%. The number of prokaryotes was not large and varied from 1.87 × 10(8) to 1.40 × 10(9) cells/g of soil, while the biomass of fungi was very significant and varied from 0.021 to 0.715 mg/g of soil. The length of actinomycete mycelium was small—from 0.77 to 88.18 m/g of soil, as was the length of fungal hyphae—an order of magnitude higher (up to 504.22 m/g of soil). The proportion of fungal mycelium, an active component of fungal biomass, varied from 25% to 89%. Most (from 65% to 100%) of mycobiota propagules were represented by specimens of small sizes, 2–3 microns. Thus, it is shown that, despite the extreme position on the mainland land of Fennoscandia, local soils had a significant number of microorganisms, on which the productivity of ecosystems largely depends.
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spelling pubmed-85396782021-10-24 Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula Korneykova, Maria Nikitin, Dmitry Myazin, Vladimir Microorganisms Article The soil microbiome of the Barents Sea coast of the Kola Peninsula is here characterized for the first time. The content of copies of ribosomal genes of archaea, bacteria, and fungi was determined by real-time PCR. Reserves and structure of biomass of soil microorganisms such as total biomass of fungi and prokaryotes, length and diameter of mycelium of fungi and actinomycetes, proportion of mycelium in biomass, number of spores and prokaryotic cells, proportion of small and large fungal propagules, and morphology of mycobiota spores were determined. The largest number of ribosomal gene copies was found for bacteria (from 6.47 × 10(9) to 3.02 × 10(11) per g soil). The number of copies of ribosomal genes of fungi and archaea varied within 10(7)–10(9) copies of genes/g soil. The biomass of microorganisms (prokaryotes and fungi in total) varied from 0.023 to 0.840 mg/g soil. The share of mycobiota in the microbial biomass ranged from 90% to 97%. The number of prokaryotes was not large and varied from 1.87 × 10(8) to 1.40 × 10(9) cells/g of soil, while the biomass of fungi was very significant and varied from 0.021 to 0.715 mg/g of soil. The length of actinomycete mycelium was small—from 0.77 to 88.18 m/g of soil, as was the length of fungal hyphae—an order of magnitude higher (up to 504.22 m/g of soil). The proportion of fungal mycelium, an active component of fungal biomass, varied from 25% to 89%. Most (from 65% to 100%) of mycobiota propagules were represented by specimens of small sizes, 2–3 microns. Thus, it is shown that, despite the extreme position on the mainland land of Fennoscandia, local soils had a significant number of microorganisms, on which the productivity of ecosystems largely depends. MDPI 2021-10-10 /pmc/articles/PMC8539678/ /pubmed/34683447 http://dx.doi.org/10.3390/microorganisms9102126 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Korneykova, Maria
Nikitin, Dmitry
Myazin, Vladimir
Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula
title Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula
title_full Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula
title_fullStr Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula
title_full_unstemmed Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula
title_short Qualitative and Quantitative Characteristics of Soil Microbiome of Barents Sea Coast, Kola Peninsula
title_sort qualitative and quantitative characteristics of soil microbiome of barents sea coast, kola peninsula
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8539678/
https://www.ncbi.nlm.nih.gov/pubmed/34683447
http://dx.doi.org/10.3390/microorganisms9102126
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