Cargando…

A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset

Although prostate cancer is one of the most common causes of mortality and morbidity in advancing-age males, early diagnosis improves prognosis and modifies the therapy of choice. The aim of this study was the evaluation of a combined radiomics and machine learning approach on a publicly available d...

Descripción completa

Detalles Bibliográficos
Autores principales: Donisi, Leandro, Cesarelli, Giuseppe, Castaldo, Anna, De Lucia, Davide Raffaele, Nessuno, Francesca, Spadarella, Gaia, Ricciardi, Carlo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8540196/
https://www.ncbi.nlm.nih.gov/pubmed/34677301
http://dx.doi.org/10.3390/jimaging7100215
_version_ 1784588928739704832
author Donisi, Leandro
Cesarelli, Giuseppe
Castaldo, Anna
De Lucia, Davide Raffaele
Nessuno, Francesca
Spadarella, Gaia
Ricciardi, Carlo
author_facet Donisi, Leandro
Cesarelli, Giuseppe
Castaldo, Anna
De Lucia, Davide Raffaele
Nessuno, Francesca
Spadarella, Gaia
Ricciardi, Carlo
author_sort Donisi, Leandro
collection PubMed
description Although prostate cancer is one of the most common causes of mortality and morbidity in advancing-age males, early diagnosis improves prognosis and modifies the therapy of choice. The aim of this study was the evaluation of a combined radiomics and machine learning approach on a publicly available dataset in order to distinguish a clinically significant from a clinically non-significant prostate lesion. A total of 299 prostate lesions were included in the analysis. A univariate statistical analysis was performed to prove the goodness of the 60 extracted radiomic features in distinguishing prostate lesions. Then, a 10-fold cross-validation was used to train and test some models and the evaluation metrics were calculated; finally, a hold-out was performed and a wrapper feature selection was applied. The employed algorithms were Naïve bayes, K nearest neighbour and some tree-based ones. The tree-based algorithms achieved the highest evaluation metrics, with accuracies over 80%, and area-under-the-curve receiver-operating characteristics below 0.80. Combined machine learning algorithms and radiomics based on clinical, routine, multiparametric, magnetic-resonance imaging were demonstrated to be a useful tool in prostate cancer stratification.
format Online
Article
Text
id pubmed-8540196
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-85401962021-10-28 A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset Donisi, Leandro Cesarelli, Giuseppe Castaldo, Anna De Lucia, Davide Raffaele Nessuno, Francesca Spadarella, Gaia Ricciardi, Carlo J Imaging Article Although prostate cancer is one of the most common causes of mortality and morbidity in advancing-age males, early diagnosis improves prognosis and modifies the therapy of choice. The aim of this study was the evaluation of a combined radiomics and machine learning approach on a publicly available dataset in order to distinguish a clinically significant from a clinically non-significant prostate lesion. A total of 299 prostate lesions were included in the analysis. A univariate statistical analysis was performed to prove the goodness of the 60 extracted radiomic features in distinguishing prostate lesions. Then, a 10-fold cross-validation was used to train and test some models and the evaluation metrics were calculated; finally, a hold-out was performed and a wrapper feature selection was applied. The employed algorithms were Naïve bayes, K nearest neighbour and some tree-based ones. The tree-based algorithms achieved the highest evaluation metrics, with accuracies over 80%, and area-under-the-curve receiver-operating characteristics below 0.80. Combined machine learning algorithms and radiomics based on clinical, routine, multiparametric, magnetic-resonance imaging were demonstrated to be a useful tool in prostate cancer stratification. MDPI 2021-10-18 /pmc/articles/PMC8540196/ /pubmed/34677301 http://dx.doi.org/10.3390/jimaging7100215 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Donisi, Leandro
Cesarelli, Giuseppe
Castaldo, Anna
De Lucia, Davide Raffaele
Nessuno, Francesca
Spadarella, Gaia
Ricciardi, Carlo
A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset
title A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset
title_full A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset
title_fullStr A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset
title_full_unstemmed A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset
title_short A Combined Radiomics and Machine Learning Approach to Distinguish Clinically Significant Prostate Lesions on a Publicly Available MRI Dataset
title_sort combined radiomics and machine learning approach to distinguish clinically significant prostate lesions on a publicly available mri dataset
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8540196/
https://www.ncbi.nlm.nih.gov/pubmed/34677301
http://dx.doi.org/10.3390/jimaging7100215
work_keys_str_mv AT donisileandro acombinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT cesarelligiuseppe acombinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT castaldoanna acombinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT deluciadavideraffaele acombinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT nessunofrancesca acombinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT spadarellagaia acombinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT ricciardicarlo acombinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT donisileandro combinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT cesarelligiuseppe combinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT castaldoanna combinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT deluciadavideraffaele combinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT nessunofrancesca combinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT spadarellagaia combinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset
AT ricciardicarlo combinedradiomicsandmachinelearningapproachtodistinguishclinicallysignificantprostatelesionsonapubliclyavailablemridataset