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Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer
Tissue inhibitor of metalloproteinases 2 (TIMP2) is a member of the TIMP gene family. Accumulated evidence indicates that TIMP2 plays a significant role in various tumor processes including cell growth, apoptosis, invasion, and metastasis. However, the expression patterns and exact roles of TIMP2 ha...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542135/ https://www.ncbi.nlm.nih.gov/pubmed/34678879 http://dx.doi.org/10.1097/MD.0000000000027489 |
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author | Chen, Wen-Quan Yang, Su-Jin Xu, Wen-Xiu Deng, Fei Wang, Dan-Dan Tang, Jin-Hai |
author_facet | Chen, Wen-Quan Yang, Su-Jin Xu, Wen-Xiu Deng, Fei Wang, Dan-Dan Tang, Jin-Hai |
author_sort | Chen, Wen-Quan |
collection | PubMed |
description | Tissue inhibitor of metalloproteinases 2 (TIMP2) is a member of the TIMP gene family. Accumulated evidence indicates that TIMP2 plays a significant role in various tumor processes including cell growth, apoptosis, invasion, and metastasis. However, the expression patterns and exact roles of TIMP2 had not been elucidated in breast cancer. In our research, we evaluated the expression and prognostic value of TIMP2 in breast cancer through analyzing various databases including Oncomine, bc-GenExMiner, PrognoScan, UCSC Xena, Kaplan–Meier Plotter, and PPI network. The results showed that TIMP2 was down-regulated in various breast cancer subtypes. Additionally, TIMP2 was significantly associated with age, estrogen receptor status, basal-like group, triple-negative breast cancer, PAM50 subtypes, and RSSPC subtypes. Also, the expression of TIMP2 was related to overall survival with different clinical characteristics. We analyzed the co-expressed genes with TIMP2 and interaction information with other proteins. These results disclosed that TIMP2 might serve as a potential target and prognostic biomarker in breast cancer. However, additional research is required to demonstrate our findings and motivate the clinical importance of TIMP2 in breast cancer. |
format | Online Article Text |
id | pubmed-8542135 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-85421352021-10-25 Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer Chen, Wen-Quan Yang, Su-Jin Xu, Wen-Xiu Deng, Fei Wang, Dan-Dan Tang, Jin-Hai Medicine (Baltimore) 5700 Tissue inhibitor of metalloproteinases 2 (TIMP2) is a member of the TIMP gene family. Accumulated evidence indicates that TIMP2 plays a significant role in various tumor processes including cell growth, apoptosis, invasion, and metastasis. However, the expression patterns and exact roles of TIMP2 had not been elucidated in breast cancer. In our research, we evaluated the expression and prognostic value of TIMP2 in breast cancer through analyzing various databases including Oncomine, bc-GenExMiner, PrognoScan, UCSC Xena, Kaplan–Meier Plotter, and PPI network. The results showed that TIMP2 was down-regulated in various breast cancer subtypes. Additionally, TIMP2 was significantly associated with age, estrogen receptor status, basal-like group, triple-negative breast cancer, PAM50 subtypes, and RSSPC subtypes. Also, the expression of TIMP2 was related to overall survival with different clinical characteristics. We analyzed the co-expressed genes with TIMP2 and interaction information with other proteins. These results disclosed that TIMP2 might serve as a potential target and prognostic biomarker in breast cancer. However, additional research is required to demonstrate our findings and motivate the clinical importance of TIMP2 in breast cancer. Lippincott Williams & Wilkins 2021-10-22 /pmc/articles/PMC8542135/ /pubmed/34678879 http://dx.doi.org/10.1097/MD.0000000000027489 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/4.0 (https://creativecommons.org/licenses/by/4.0/) |
spellingShingle | 5700 Chen, Wen-Quan Yang, Su-Jin Xu, Wen-Xiu Deng, Fei Wang, Dan-Dan Tang, Jin-Hai Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer |
title | Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer |
title_full | Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer |
title_fullStr | Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer |
title_full_unstemmed | Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer |
title_short | Bioinformatics analysis revealing prognostic significance of TIMP2 gene in breast cancer |
title_sort | bioinformatics analysis revealing prognostic significance of timp2 gene in breast cancer |
topic | 5700 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542135/ https://www.ncbi.nlm.nih.gov/pubmed/34678879 http://dx.doi.org/10.1097/MD.0000000000027489 |
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