Cargando…
Draft genomes of non-nitrogen-fixing Frankia strains
In this study, we describe the genomes of two novel candidate species of non-nitrogen fixing Frankia that were isolated from the root nodules of Coriaria nepalensis and Alnus glutinosa, genospecies CN and Ag, respectively. Comparative genomic analyses revealed that both genospecies lack genes essent...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542509/ https://www.ncbi.nlm.nih.gov/pubmed/34703504 http://dx.doi.org/10.7150/jgen.65429 |
_version_ | 1784589446409093120 |
---|---|
author | Carlos-Shanley, Camila Guerra, Trina Hahn, Dittmar |
author_facet | Carlos-Shanley, Camila Guerra, Trina Hahn, Dittmar |
author_sort | Carlos-Shanley, Camila |
collection | PubMed |
description | In this study, we describe the genomes of two novel candidate species of non-nitrogen fixing Frankia that were isolated from the root nodules of Coriaria nepalensis and Alnus glutinosa, genospecies CN and Ag, respectively. Comparative genomic analyses revealed that both genospecies lack genes essential for nitrogen-fixation and possess genes involved in the degradation of plant cell walls. Additionally, we found distinct biosynthetic gene clusters in each genospecies. The availability of these genomes will contribute to the study of the taxonomy and evolution of actinorhizal symbioses. |
format | Online Article Text |
id | pubmed-8542509 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-85425092021-10-25 Draft genomes of non-nitrogen-fixing Frankia strains Carlos-Shanley, Camila Guerra, Trina Hahn, Dittmar J Genomics Research Paper In this study, we describe the genomes of two novel candidate species of non-nitrogen fixing Frankia that were isolated from the root nodules of Coriaria nepalensis and Alnus glutinosa, genospecies CN and Ag, respectively. Comparative genomic analyses revealed that both genospecies lack genes essential for nitrogen-fixation and possess genes involved in the degradation of plant cell walls. Additionally, we found distinct biosynthetic gene clusters in each genospecies. The availability of these genomes will contribute to the study of the taxonomy and evolution of actinorhizal symbioses. Ivyspring International Publisher 2021-10-22 /pmc/articles/PMC8542509/ /pubmed/34703504 http://dx.doi.org/10.7150/jgen.65429 Text en © The author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Carlos-Shanley, Camila Guerra, Trina Hahn, Dittmar Draft genomes of non-nitrogen-fixing Frankia strains |
title | Draft genomes of non-nitrogen-fixing Frankia strains |
title_full | Draft genomes of non-nitrogen-fixing Frankia strains |
title_fullStr | Draft genomes of non-nitrogen-fixing Frankia strains |
title_full_unstemmed | Draft genomes of non-nitrogen-fixing Frankia strains |
title_short | Draft genomes of non-nitrogen-fixing Frankia strains |
title_sort | draft genomes of non-nitrogen-fixing frankia strains |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542509/ https://www.ncbi.nlm.nih.gov/pubmed/34703504 http://dx.doi.org/10.7150/jgen.65429 |
work_keys_str_mv | AT carlosshanleycamila draftgenomesofnonnitrogenfixingfrankiastrains AT guerratrina draftgenomesofnonnitrogenfixingfrankiastrains AT hahndittmar draftgenomesofnonnitrogenfixingfrankiastrains |