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Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma
Background: Lung adenocarcinoma (LUAD) is the most predomintnt lung cancer subtype with increasing morbidity and mortality. Previous studies have shown that aquaporin (AQP) family genes were correlated with tumor progression and metastasis in several kinds of malignancies. However, their biological...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542973/ https://www.ncbi.nlm.nih.gov/pubmed/34708074 http://dx.doi.org/10.3389/fmolb.2021.736367 |
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author | Lin, Guofu Chen, Luyang Lin, Lanlan Lin, Hai Guo, Zhifeng Xu, Yingxuan Hu, Chanchan Fu, Jinglan Lin, Qinhui Chen, Wenhan Zeng, Yiming Xu, Yuan |
author_facet | Lin, Guofu Chen, Luyang Lin, Lanlan Lin, Hai Guo, Zhifeng Xu, Yingxuan Hu, Chanchan Fu, Jinglan Lin, Qinhui Chen, Wenhan Zeng, Yiming Xu, Yuan |
author_sort | Lin, Guofu |
collection | PubMed |
description | Background: Lung adenocarcinoma (LUAD) is the most predomintnt lung cancer subtype with increasing morbidity and mortality. Previous studies have shown that aquaporin (AQP) family genes were correlated with tumor progression and metastasis in several kinds of malignancies. However, their biological behaviors and prognostic values in LUAD have not been comprehensively elucidated. Methods: RNA sequencing and real-time reverse transcription PCR (RT-PCR) were used to assess AQP1/3/4/5 gene expressions in LUAD patients using GEPIA and UALCAN databases. And then Kaplan–Meier analysis, cBioPortal, Metascape, GeneMANIA, TISIDB, and TIMER were utilized to determine the prognostic value, mutation frequency, and immune cell infiltration of AQP family members in LUAD. Results: We found that AQP3 expression was significantly elevated and AQP1 expression was markedly reduced in LUAD patients, whereas the expression levels of AQP4 and AQP5 exhibited no significant changes. The Kaplan–Meier survival analysis indicated that the higher expressions of AQP1/4/5 were related to longer overall survival (OS). Of interest, AQP3 was significantly correlated with the clinical tumor stage and lower AQP3 expression showed favorable prognosis in stage I LUAD patients, which indicated that AQP3 may be a potential prognostic biomarker for patients. Through functional enrichment analysis, the functions of these four AQPs genes were mainly involved in the passive transport by aquaporins, water homeostasis, and protein tetramerization. Moreover, AQP1/3/4/5 expression was strongly associated with tumor-infiltrating lymphocytes (TILs) in LUAD. Conclusion: AQP3 can be used as a prognosis and survival biomarker for stage I LUAD. These findings may provide novel insights into developing molecular targeted therapies in LUAD. |
format | Online Article Text |
id | pubmed-8542973 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85429732021-10-26 Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma Lin, Guofu Chen, Luyang Lin, Lanlan Lin, Hai Guo, Zhifeng Xu, Yingxuan Hu, Chanchan Fu, Jinglan Lin, Qinhui Chen, Wenhan Zeng, Yiming Xu, Yuan Front Mol Biosci Molecular Biosciences Background: Lung adenocarcinoma (LUAD) is the most predomintnt lung cancer subtype with increasing morbidity and mortality. Previous studies have shown that aquaporin (AQP) family genes were correlated with tumor progression and metastasis in several kinds of malignancies. However, their biological behaviors and prognostic values in LUAD have not been comprehensively elucidated. Methods: RNA sequencing and real-time reverse transcription PCR (RT-PCR) were used to assess AQP1/3/4/5 gene expressions in LUAD patients using GEPIA and UALCAN databases. And then Kaplan–Meier analysis, cBioPortal, Metascape, GeneMANIA, TISIDB, and TIMER were utilized to determine the prognostic value, mutation frequency, and immune cell infiltration of AQP family members in LUAD. Results: We found that AQP3 expression was significantly elevated and AQP1 expression was markedly reduced in LUAD patients, whereas the expression levels of AQP4 and AQP5 exhibited no significant changes. The Kaplan–Meier survival analysis indicated that the higher expressions of AQP1/4/5 were related to longer overall survival (OS). Of interest, AQP3 was significantly correlated with the clinical tumor stage and lower AQP3 expression showed favorable prognosis in stage I LUAD patients, which indicated that AQP3 may be a potential prognostic biomarker for patients. Through functional enrichment analysis, the functions of these four AQPs genes were mainly involved in the passive transport by aquaporins, water homeostasis, and protein tetramerization. Moreover, AQP1/3/4/5 expression was strongly associated with tumor-infiltrating lymphocytes (TILs) in LUAD. Conclusion: AQP3 can be used as a prognosis and survival biomarker for stage I LUAD. These findings may provide novel insights into developing molecular targeted therapies in LUAD. Frontiers Media S.A. 2021-10-11 /pmc/articles/PMC8542973/ /pubmed/34708074 http://dx.doi.org/10.3389/fmolb.2021.736367 Text en Copyright © 2021 Lin, Chen, Lin, Lin, Guo, Xu, Hu, Fu, Lin, Chen, Zeng and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Lin, Guofu Chen, Luyang Lin, Lanlan Lin, Hai Guo, Zhifeng Xu, Yingxuan Hu, Chanchan Fu, Jinglan Lin, Qinhui Chen, Wenhan Zeng, Yiming Xu, Yuan Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma |
title | Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma |
title_full | Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma |
title_fullStr | Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma |
title_full_unstemmed | Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma |
title_short | Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma |
title_sort | comprehensive analysis of aquaporin superfamily in lung adenocarcinoma |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542973/ https://www.ncbi.nlm.nih.gov/pubmed/34708074 http://dx.doi.org/10.3389/fmolb.2021.736367 |
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