Cargando…

Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma

Background: Lung adenocarcinoma (LUAD) is the most predomintnt lung cancer subtype with increasing morbidity and mortality. Previous studies have shown that aquaporin (AQP) family genes were correlated with tumor progression and metastasis in several kinds of malignancies. However, their biological...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Guofu, Chen, Luyang, Lin, Lanlan, Lin, Hai, Guo, Zhifeng, Xu, Yingxuan, Hu, Chanchan, Fu, Jinglan, Lin, Qinhui, Chen, Wenhan, Zeng, Yiming, Xu, Yuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542973/
https://www.ncbi.nlm.nih.gov/pubmed/34708074
http://dx.doi.org/10.3389/fmolb.2021.736367
_version_ 1784589541860966400
author Lin, Guofu
Chen, Luyang
Lin, Lanlan
Lin, Hai
Guo, Zhifeng
Xu, Yingxuan
Hu, Chanchan
Fu, Jinglan
Lin, Qinhui
Chen, Wenhan
Zeng, Yiming
Xu, Yuan
author_facet Lin, Guofu
Chen, Luyang
Lin, Lanlan
Lin, Hai
Guo, Zhifeng
Xu, Yingxuan
Hu, Chanchan
Fu, Jinglan
Lin, Qinhui
Chen, Wenhan
Zeng, Yiming
Xu, Yuan
author_sort Lin, Guofu
collection PubMed
description Background: Lung adenocarcinoma (LUAD) is the most predomintnt lung cancer subtype with increasing morbidity and mortality. Previous studies have shown that aquaporin (AQP) family genes were correlated with tumor progression and metastasis in several kinds of malignancies. However, their biological behaviors and prognostic values in LUAD have not been comprehensively elucidated. Methods: RNA sequencing and real-time reverse transcription PCR (RT-PCR) were used to assess AQP1/3/4/5 gene expressions in LUAD patients using GEPIA and UALCAN databases. And then Kaplan–Meier analysis, cBioPortal, Metascape, GeneMANIA, TISIDB, and TIMER were utilized to determine the prognostic value, mutation frequency, and immune cell infiltration of AQP family members in LUAD. Results: We found that AQP3 expression was significantly elevated and AQP1 expression was markedly reduced in LUAD patients, whereas the expression levels of AQP4 and AQP5 exhibited no significant changes. The Kaplan–Meier survival analysis indicated that the higher expressions of AQP1/4/5 were related to longer overall survival (OS). Of interest, AQP3 was significantly correlated with the clinical tumor stage and lower AQP3 expression showed favorable prognosis in stage I LUAD patients, which indicated that AQP3 may be a potential prognostic biomarker for patients. Through functional enrichment analysis, the functions of these four AQPs genes were mainly involved in the passive transport by aquaporins, water homeostasis, and protein tetramerization. Moreover, AQP1/3/4/5 expression was strongly associated with tumor-infiltrating lymphocytes (TILs) in LUAD. Conclusion: AQP3 can be used as a prognosis and survival biomarker for stage I LUAD. These findings may provide novel insights into developing molecular targeted therapies in LUAD.
format Online
Article
Text
id pubmed-8542973
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-85429732021-10-26 Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma Lin, Guofu Chen, Luyang Lin, Lanlan Lin, Hai Guo, Zhifeng Xu, Yingxuan Hu, Chanchan Fu, Jinglan Lin, Qinhui Chen, Wenhan Zeng, Yiming Xu, Yuan Front Mol Biosci Molecular Biosciences Background: Lung adenocarcinoma (LUAD) is the most predomintnt lung cancer subtype with increasing morbidity and mortality. Previous studies have shown that aquaporin (AQP) family genes were correlated with tumor progression and metastasis in several kinds of malignancies. However, their biological behaviors and prognostic values in LUAD have not been comprehensively elucidated. Methods: RNA sequencing and real-time reverse transcription PCR (RT-PCR) were used to assess AQP1/3/4/5 gene expressions in LUAD patients using GEPIA and UALCAN databases. And then Kaplan–Meier analysis, cBioPortal, Metascape, GeneMANIA, TISIDB, and TIMER were utilized to determine the prognostic value, mutation frequency, and immune cell infiltration of AQP family members in LUAD. Results: We found that AQP3 expression was significantly elevated and AQP1 expression was markedly reduced in LUAD patients, whereas the expression levels of AQP4 and AQP5 exhibited no significant changes. The Kaplan–Meier survival analysis indicated that the higher expressions of AQP1/4/5 were related to longer overall survival (OS). Of interest, AQP3 was significantly correlated with the clinical tumor stage and lower AQP3 expression showed favorable prognosis in stage I LUAD patients, which indicated that AQP3 may be a potential prognostic biomarker for patients. Through functional enrichment analysis, the functions of these four AQPs genes were mainly involved in the passive transport by aquaporins, water homeostasis, and protein tetramerization. Moreover, AQP1/3/4/5 expression was strongly associated with tumor-infiltrating lymphocytes (TILs) in LUAD. Conclusion: AQP3 can be used as a prognosis and survival biomarker for stage I LUAD. These findings may provide novel insights into developing molecular targeted therapies in LUAD. Frontiers Media S.A. 2021-10-11 /pmc/articles/PMC8542973/ /pubmed/34708074 http://dx.doi.org/10.3389/fmolb.2021.736367 Text en Copyright © 2021 Lin, Chen, Lin, Lin, Guo, Xu, Hu, Fu, Lin, Chen, Zeng and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Lin, Guofu
Chen, Luyang
Lin, Lanlan
Lin, Hai
Guo, Zhifeng
Xu, Yingxuan
Hu, Chanchan
Fu, Jinglan
Lin, Qinhui
Chen, Wenhan
Zeng, Yiming
Xu, Yuan
Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma
title Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma
title_full Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma
title_fullStr Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma
title_full_unstemmed Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma
title_short Comprehensive Analysis of Aquaporin Superfamily in Lung Adenocarcinoma
title_sort comprehensive analysis of aquaporin superfamily in lung adenocarcinoma
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8542973/
https://www.ncbi.nlm.nih.gov/pubmed/34708074
http://dx.doi.org/10.3389/fmolb.2021.736367
work_keys_str_mv AT linguofu comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT chenluyang comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT linlanlan comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT linhai comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT guozhifeng comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT xuyingxuan comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT huchanchan comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT fujinglan comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT linqinhui comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT chenwenhan comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT zengyiming comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma
AT xuyuan comprehensiveanalysisofaquaporinsuperfamilyinlungadenocarcinoma