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Robustness of convolutional neural networks to physiological electrocardiogram noise
The electrocardiogram (ECG) is a widespread diagnostic tool in healthcare and supports the diagnosis of cardiovascular disorders. Deep learning methods are a successful and popular technique to detect indications of disorders from an ECG signal. However, there are open questions around the robustnes...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8543045/ https://www.ncbi.nlm.nih.gov/pubmed/34689617 http://dx.doi.org/10.1098/rsta.2020.0262 |
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author | Venton, J. Harris, P. M. Sundar, A. Smith, N. A. S. Aston, P. J. |
author_facet | Venton, J. Harris, P. M. Sundar, A. Smith, N. A. S. Aston, P. J. |
author_sort | Venton, J. |
collection | PubMed |
description | The electrocardiogram (ECG) is a widespread diagnostic tool in healthcare and supports the diagnosis of cardiovascular disorders. Deep learning methods are a successful and popular technique to detect indications of disorders from an ECG signal. However, there are open questions around the robustness of these methods to various factors, including physiological ECG noise. In this study, we generate clean and noisy versions of an ECG dataset before applying symmetric projection attractor reconstruction (SPAR) and scalogram image transformations. A convolutional neural network is used to classify these image transforms. For the clean ECG dataset, F1 scores for SPAR attractor and scalogram transforms were 0.70 and 0.79, respectively. Scores decreased by less than 0.05 for the noisy ECG datasets. Notably, when the network trained on clean data was used to classify the noisy datasets, performance decreases of up to 0.18 in F1 scores were seen. However, when the network trained on the noisy data was used to classify the clean dataset, the decrease was less than 0.05. We conclude that physiological ECG noise impacts classification using deep learning methods and careful consideration should be given to the inclusion of noisy ECG signals in the training data when developing supervised networks for ECG classification. This article is part of the theme issue ‘Advanced computation in cardiovascular physiology: new challenges and opportunities’. |
format | Online Article Text |
id | pubmed-8543045 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-85430452022-02-02 Robustness of convolutional neural networks to physiological electrocardiogram noise Venton, J. Harris, P. M. Sundar, A. Smith, N. A. S. Aston, P. J. Philos Trans A Math Phys Eng Sci Articles The electrocardiogram (ECG) is a widespread diagnostic tool in healthcare and supports the diagnosis of cardiovascular disorders. Deep learning methods are a successful and popular technique to detect indications of disorders from an ECG signal. However, there are open questions around the robustness of these methods to various factors, including physiological ECG noise. In this study, we generate clean and noisy versions of an ECG dataset before applying symmetric projection attractor reconstruction (SPAR) and scalogram image transformations. A convolutional neural network is used to classify these image transforms. For the clean ECG dataset, F1 scores for SPAR attractor and scalogram transforms were 0.70 and 0.79, respectively. Scores decreased by less than 0.05 for the noisy ECG datasets. Notably, when the network trained on clean data was used to classify the noisy datasets, performance decreases of up to 0.18 in F1 scores were seen. However, when the network trained on the noisy data was used to classify the clean dataset, the decrease was less than 0.05. We conclude that physiological ECG noise impacts classification using deep learning methods and careful consideration should be given to the inclusion of noisy ECG signals in the training data when developing supervised networks for ECG classification. This article is part of the theme issue ‘Advanced computation in cardiovascular physiology: new challenges and opportunities’. The Royal Society 2021-12-13 2021-10-25 /pmc/articles/PMC8543045/ /pubmed/34689617 http://dx.doi.org/10.1098/rsta.2020.0262 Text en © 2021 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Articles Venton, J. Harris, P. M. Sundar, A. Smith, N. A. S. Aston, P. J. Robustness of convolutional neural networks to physiological electrocardiogram noise |
title | Robustness of convolutional neural networks to physiological electrocardiogram noise |
title_full | Robustness of convolutional neural networks to physiological electrocardiogram noise |
title_fullStr | Robustness of convolutional neural networks to physiological electrocardiogram noise |
title_full_unstemmed | Robustness of convolutional neural networks to physiological electrocardiogram noise |
title_short | Robustness of convolutional neural networks to physiological electrocardiogram noise |
title_sort | robustness of convolutional neural networks to physiological electrocardiogram noise |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8543045/ https://www.ncbi.nlm.nih.gov/pubmed/34689617 http://dx.doi.org/10.1098/rsta.2020.0262 |
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