Cargando…

Complete chloroplast genome sequences of five Bruguiera species (Rhizophoraceae): comparative analysis and phylogenetic relationships

Bruguiera is a genus of true mangroves that are mostly distributed in the Indo-West Pacific region. However, the number of published whole chloroplast genome sequences of Bruguiera species are limited. Here, the complete chloroplast sequences of five Bruguiera species were sequenced and assembled us...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ruang-areerate, Panthita, Kongkachana, Wasitthee, Naktang, Chaiwat, Sonthirod, Chutima, Narong, Nattapol, Jomchai, Nukoon, Maprasop, Pasin, Maknual, Chatree, Phormsin, Nawin, Shearman, Jeremy R., Pootakham, Wirulda, Tangphatsornruang, Sithichoke
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2021
Materias:	Genetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8544253/ https://www.ncbi.nlm.nih.gov/pubmed/34733586 http://dx.doi.org/10.7717/peerj.12268

Ejemplares similares

Assessment of the Genetic Diversity and Population Structure of Rhizophora apiculata Blume (Rhizophoraceae) in Thailand
por: Ruang-areerate, Panthita, et al.
Publicado: (2022)

De Novo Reference Assembly of the Upriver Orange Mangrove (Bruguiera sexangula) Genome
por: Pootakham, Wirulda, et al.
Publicado: (2022)

Comparative Analysis and Phylogenetic Relationships of Ceriops Species (Rhizophoraceae) and Avicennia lanata (Acanthaceae): Insight into the Chloroplast Genome Evolution between Middle and Seaward Zones of Mangrove Forests
por: Ruang-areerate, Panthita, et al.
Publicado: (2022)

The complete chloroplast genome sequence of Intsia bijuga (Colebr.) Kuntze (Fabaceae: Detaroideae: Afzelieae)
por: U-thoomporn, Sonicha, et al.
Publicado: (2022)

The complete mitochondrial genome of Luffa acutangula
por: Ruang-areerate, Panthita, et al.
Publicado: (2020)

Large-Scale SNP Discovery through RNA Sequencing and SNP Genotyping by Targeted Enrichment Sequencing in Cassava (Manihot esculenta Crantz)
por: Pootakham, Wirulda, et al.
Publicado: (2014)

Heat‐induced shift in coral microbiome reveals several members of the Rhodobacteraceae family as indicator species for thermal stress in Porites lutea
por: Pootakham, Wirulda, et al.
Publicado: (2019)

A Chromosome-Scale Genome Assembly of Mitragyna speciosa (Kratom) and the Assessment of Its Genetic Diversity in Thailand
por: Pootakham, Wirulda, et al.
Publicado: (2022)

SNP Identification from RNA Sequencing and Linkage Map Construction of Rubber Tree for Anchoring the Draft Genome
por: Shearman, Jeremy R., et al.
Publicado: (2015)

The complete mitochondrial genome of the Hipposideros pendleburyi (Pendlebury's leaf-nosed bat) an endemic species in Thailand
por: Kongkachana, Wasitthee, et al.
Publicado: (2021)

A de novo reference assembly of the yellow mangrove Ceriops zippeliana genome
por: Pootakham, Wirulda, et al.
Publicado: (2022)

Dynamics of coral‐associated microbiomes during a thermal bleaching event
por: Pootakham, Wirulda, et al.
Publicado: (2018)

Effects of methylation-sensitive enzymes on the enrichment of genic SNPs and the degree of genome complexity reduction in a two-enzyme genotyping-by-sequencing (GBS) approach: a case study in oil palm (Elaeis guineensis)
por: Pootakham, Wirulda, et al.
Publicado: (2016)

Construction of a high-density integrated genetic linkage map of rubber tree (Hevea brasiliensis) using genotyping-by-sequencing (GBS)
por: Pootakham, Wirulda, et al.
Publicado: (2015)

A SNP variation in an expansin (EgExp4) gene affects height in oil palm
por: Somyong, Suthasinee, et al.
Publicado: (2022)

The two chromosomes of the mitochondrial genome of a sugarcane cultivar: assembly and recombination analysis using long PacBio reads
por: Shearman, Jeremy R., et al.
Publicado: (2016)

Assessment of the Genetic Diversity and Population Structure of Rhizophora mucronata along Coastal Areas in Thailand
por: Naktang, Chaiwat, et al.
Publicado: (2023)

De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species
por: Pootakham, Wirulda, et al.
Publicado: (2017)

The complete chloroplast genome sequence and phylogenetic analysis of Heritiera fomes Buch.-Ham. (Malvales: Sterculiaceae)
por: Yoocha, Thippawan, et al.
Publicado: (2023)

The Genome and Transcriptome Analysis of the Vigna mungo Chloroplast
por: Nawae, Wanapinun, et al.
Publicado: (2020)

Genome assemblies of Vigna reflexo-pilosa (créole bean) and its progenitors, Vigna hirtella and Vigna trinervia, revealed homoeolog expression bias and expression-level dominance in the allotetraploid
por: Pootakham, Wirulda, et al.
Publicado: (2023)

Transcriptome analysis of oil palm inflorescences revealed candidate genes for an auxin signaling pathway involved in parthenocarpy
por: Somyong, Suthasinee, et al.
Publicado: (2018)

Chloroplast genome data of Luffa acutangula and Luffa aegyptiaca and their phylogenetic relationships
por: Yundaeng, Chutintorn, et al.
Publicado: (2020)

Assembly and analysis of a male sterile rubber tree mitochondrial genome reveals DNA rearrangement events and a novel transcript
por: Shearman, Jeremy R, et al.
Publicado: (2014)

Assembly of the durian chloroplast genome using long PacBio reads
por: Shearman, Jeremy R., et al.
Publicado: (2020)

High resolution profiling of coral-associated bacterial communities using full-length 16S rRNA sequence data from PacBio SMRT sequencing system
por: Pootakham, Wirulda, et al.
Publicado: (2017)

The First Genetic Linkage Map of Winged Bean [Psophocarpus tetragonolobus (L.) DC.] and QTL Mapping for Flower-, Pod-, and Seed-Related Traits
por: Chankaew, Sompong, et al.
Publicado: (2022)

The complete mitochondrial genome sequence of the karst-dwelling crab, Terrapotamon thungwa (Crustacea: Brachyura: Potamidae)
por: Yundaeng, Chutintorn, et al.
Publicado: (2022)

Resequencing of durian genomes reveals large genetic variations among different cultivars
por: Nawae, Wanapinun, et al.
Publicado: (2023)

The complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)
por: Sonthirod, Chutima, et al.
Publicado: (2022)

A draft chromosome-scale genome assembly of a commercial sugarcane
por: Shearman, Jeremy R., et al.
Publicado: (2022)

The complete mitochondrial genome sequence of the mountain crab Indochinamon bhumibol
por: Naktang, Chaiwat, et al.
Publicado: (2021)

Differential expression between drought-tolerant and drought-sensitive sugarcane under mild and moderate water stress as revealed by a comparative analysis of leaf transcriptome
por: Nawae, Wanapinun, et al.
Publicado: (2020)

The complete chloroplast genome of Sonneratia griffithii Kurz (Lythraceae)
por: Sangsrakru, Duangjai, et al.
Publicado: (2022)

Genome assembly of the Pendlebury’s roundleaf bat, Hipposideros pendleburyi, revealed the expansion of Tc1/Mariner DNA transposons in Rhinolophoidea
por: Nawae, Wanapinun, et al.
Publicado: (2022)

Transcriptome sequencing revealed the influence of blue light on the expression levels of light-stress response genes in Centella asiatica
por: Nawae, Wanapinun, et al.
Publicado: (2021)

Identification of Candidate Gene-Based Markers for Girth Growth in Rubber Trees
por: Bhusudsawang, Gunlayarat, et al.
Publicado: (2021)

Distance-based paper device using combined SYBR safe and gold nanoparticle probe LAMP assay to detect Leishmania among patients with HIV
por: Ruang-areerate, Toon, et al.
Publicado: (2022)

Zoonotic Transmission of Blastocystis Subtype 1 among People in Eastern Communities of Thailand: Organic Fertilizer from Pig Feces as a Potential Source
por: Ruang-areerate, Toon, et al.
Publicado: (2021)

Transcriptome Sequencing of Hevea brasiliensis for Development of Microsatellite Markers and Construction of a Genetic Linkage Map
por: Triwitayakorn, Kanokporn, et al.
Publicado: (2011)

Cannot write session to /tmp/vufind_sessions/sess_uafb6qshim2e923ec5ee0rficj