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ODTiD: Optic Nerve Head SD-OCT Image Dataset
INTRODUCTION: Optic disc tilt (ODT) or tilted optic disc is a common finding in the general population. It is due to anomalous development caused by the malclosure of the embryonic optic fissure. ODT is commonly associated with high myopia as well as other conditions. In recent days, the common meth...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Dove
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8544271/ https://www.ncbi.nlm.nih.gov/pubmed/34707343 http://dx.doi.org/10.2147/OPTH.S337174 |
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author | Jothi Balaji, Janarthanam Lakshminarayanan, Vasudevan |
author_facet | Jothi Balaji, Janarthanam Lakshminarayanan, Vasudevan |
author_sort | Jothi Balaji, Janarthanam |
collection | PubMed |
description | INTRODUCTION: Optic disc tilt (ODT) or tilted optic disc is a common finding in the general population. It is due to anomalous development caused by the malclosure of the embryonic optic fissure. ODT is commonly associated with high myopia as well as other conditions. In recent days, the common method to image the optic disc (OD) is by optical coherence tomography (OCT). To the best of our knowledge, there are no datasets of ODT available in the public domain. This dataset aims to make open access raw ODT OCT images to test out new image processing segmentation algorithms. METHODS: This dataset of ODT images contains both horizontal and vertical cross-sectional images obtained using spectral-domain optical coherence tomography (SD-OCT, Cirrus 5000, Carl Zeiss Meditec Inc., Dublin, CA). The optic disc cube 200×200 program was used and all the images are aligned with the center of the optic nerve head. This dataset includes images from both clinically normal (20 eyes) and myopic subjects (101 eyes). RESULTS: The dataset consists of clear (121) and manually marked (121) images resulting in a total of 242 images. The age distribution for all subjects combined is 27.24 ± 9.28 (range, 11.0–69.0) years. For normal subjects mean ± SD age distribution is 32.40 ± 17.23 years. Similarly, the myopia age distribution is 26.22 ± 6.37 years. Ground truth images, ie, manually segmented by a clinical expert are provided along with other meta-data includes age, gender, laterality, refractive error classification, spherical equivalent (SE), best-corrected visual acuity (BCVA), intraocular pressure (IOP), and axial length (AXL). CONCLUSION: This open, public database is online at the ICPSR website of the University of Michigan. The dataset can be used to test and validate newly developed automated segmentation algorithms. |
format | Online Article Text |
id | pubmed-8544271 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-85442712021-10-26 ODTiD: Optic Nerve Head SD-OCT Image Dataset Jothi Balaji, Janarthanam Lakshminarayanan, Vasudevan Clin Ophthalmol Original Research INTRODUCTION: Optic disc tilt (ODT) or tilted optic disc is a common finding in the general population. It is due to anomalous development caused by the malclosure of the embryonic optic fissure. ODT is commonly associated with high myopia as well as other conditions. In recent days, the common method to image the optic disc (OD) is by optical coherence tomography (OCT). To the best of our knowledge, there are no datasets of ODT available in the public domain. This dataset aims to make open access raw ODT OCT images to test out new image processing segmentation algorithms. METHODS: This dataset of ODT images contains both horizontal and vertical cross-sectional images obtained using spectral-domain optical coherence tomography (SD-OCT, Cirrus 5000, Carl Zeiss Meditec Inc., Dublin, CA). The optic disc cube 200×200 program was used and all the images are aligned with the center of the optic nerve head. This dataset includes images from both clinically normal (20 eyes) and myopic subjects (101 eyes). RESULTS: The dataset consists of clear (121) and manually marked (121) images resulting in a total of 242 images. The age distribution for all subjects combined is 27.24 ± 9.28 (range, 11.0–69.0) years. For normal subjects mean ± SD age distribution is 32.40 ± 17.23 years. Similarly, the myopia age distribution is 26.22 ± 6.37 years. Ground truth images, ie, manually segmented by a clinical expert are provided along with other meta-data includes age, gender, laterality, refractive error classification, spherical equivalent (SE), best-corrected visual acuity (BCVA), intraocular pressure (IOP), and axial length (AXL). CONCLUSION: This open, public database is online at the ICPSR website of the University of Michigan. The dataset can be used to test and validate newly developed automated segmentation algorithms. Dove 2021-10-21 /pmc/articles/PMC8544271/ /pubmed/34707343 http://dx.doi.org/10.2147/OPTH.S337174 Text en © 2021 Jothi Balaji and Lakshminarayanan. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Jothi Balaji, Janarthanam Lakshminarayanan, Vasudevan ODTiD: Optic Nerve Head SD-OCT Image Dataset |
title | ODTiD: Optic Nerve Head SD-OCT Image Dataset |
title_full | ODTiD: Optic Nerve Head SD-OCT Image Dataset |
title_fullStr | ODTiD: Optic Nerve Head SD-OCT Image Dataset |
title_full_unstemmed | ODTiD: Optic Nerve Head SD-OCT Image Dataset |
title_short | ODTiD: Optic Nerve Head SD-OCT Image Dataset |
title_sort | odtid: optic nerve head sd-oct image dataset |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8544271/ https://www.ncbi.nlm.nih.gov/pubmed/34707343 http://dx.doi.org/10.2147/OPTH.S337174 |
work_keys_str_mv | AT jothibalajijanarthanam odtidopticnerveheadsdoctimagedataset AT lakshminarayananvasudevan odtidopticnerveheadsdoctimagedataset |