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Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021
Several severe acute respiratory syndrome coronavirus 2 variants of concern (VOCs) emerged in late 2020; lineage B.1.1.7 initially dominated globally. However, lineages B.1.351 and P.1 represent potentially greater risk for transmission and immune escape. In British Columbia, Canada, B.1.1.7 and B.1...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Centers for Disease Control and Prevention
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8544957/ https://www.ncbi.nlm.nih.gov/pubmed/34388358 http://dx.doi.org/10.3201/eid2711.211190 |
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author | Hogan, Catherine A. Jassem, Agatha N. Sbihi, Hind Joffres, Yayuk Tyson, John R. Noftall, Kyle Taylor, Marsha Lee, Tracy Fjell, Chris Wilmer, Amanda Galbraith, John Romney, Marc G. Henry, Bonnie Krajden, Mel Galanis, Eleni Prystajecky, Natalie Hoang, Linda M.N. |
author_facet | Hogan, Catherine A. Jassem, Agatha N. Sbihi, Hind Joffres, Yayuk Tyson, John R. Noftall, Kyle Taylor, Marsha Lee, Tracy Fjell, Chris Wilmer, Amanda Galbraith, John Romney, Marc G. Henry, Bonnie Krajden, Mel Galanis, Eleni Prystajecky, Natalie Hoang, Linda M.N. |
author_sort | Hogan, Catherine A. |
collection | PubMed |
description | Several severe acute respiratory syndrome coronavirus 2 variants of concern (VOCs) emerged in late 2020; lineage B.1.1.7 initially dominated globally. However, lineages B.1.351 and P.1 represent potentially greater risk for transmission and immune escape. In British Columbia, Canada, B.1.1.7 and B.1.351 were first identified in December 2020 and P.1 in February 2021. We combined quantitative PCR and whole-genome sequencing to assess relative contribution of VOCs in nearly 67,000 infections during the first 16 weeks of 2021 in British Columbia. B.1.1.7 accounted for <10% of screened or sequenced specimens early on, increasing to >50% by week 8. P.1 accounted for <10% until week 10, increased rapidly to peak at week 12, and by week 13 codominated within 10% of rates of B.1.1.7. B.1.351 was a minority throughout. This rapid expansion of P.1 but suppression of B.1.351 expands our understanding of population-level VOC patterns and might provide clues to fitness determinants for emerging VOCs. |
format | Online Article Text |
id | pubmed-8544957 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Centers for Disease Control and Prevention |
record_format | MEDLINE/PubMed |
spelling | pubmed-85449572021-11-06 Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 Hogan, Catherine A. Jassem, Agatha N. Sbihi, Hind Joffres, Yayuk Tyson, John R. Noftall, Kyle Taylor, Marsha Lee, Tracy Fjell, Chris Wilmer, Amanda Galbraith, John Romney, Marc G. Henry, Bonnie Krajden, Mel Galanis, Eleni Prystajecky, Natalie Hoang, Linda M.N. Emerg Infect Dis Research Several severe acute respiratory syndrome coronavirus 2 variants of concern (VOCs) emerged in late 2020; lineage B.1.1.7 initially dominated globally. However, lineages B.1.351 and P.1 represent potentially greater risk for transmission and immune escape. In British Columbia, Canada, B.1.1.7 and B.1.351 were first identified in December 2020 and P.1 in February 2021. We combined quantitative PCR and whole-genome sequencing to assess relative contribution of VOCs in nearly 67,000 infections during the first 16 weeks of 2021 in British Columbia. B.1.1.7 accounted for <10% of screened or sequenced specimens early on, increasing to >50% by week 8. P.1 accounted for <10% until week 10, increased rapidly to peak at week 12, and by week 13 codominated within 10% of rates of B.1.1.7. B.1.351 was a minority throughout. This rapid expansion of P.1 but suppression of B.1.351 expands our understanding of population-level VOC patterns and might provide clues to fitness determinants for emerging VOCs. Centers for Disease Control and Prevention 2021-11 /pmc/articles/PMC8544957/ /pubmed/34388358 http://dx.doi.org/10.3201/eid2711.211190 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited. |
spellingShingle | Research Hogan, Catherine A. Jassem, Agatha N. Sbihi, Hind Joffres, Yayuk Tyson, John R. Noftall, Kyle Taylor, Marsha Lee, Tracy Fjell, Chris Wilmer, Amanda Galbraith, John Romney, Marc G. Henry, Bonnie Krajden, Mel Galanis, Eleni Prystajecky, Natalie Hoang, Linda M.N. Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 |
title | Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 |
title_full | Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 |
title_fullStr | Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 |
title_full_unstemmed | Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 |
title_short | Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 |
title_sort | rapid increase in sars-cov-2 p.1 lineage leading to codominance with b.1.1.7 lineage, british columbia, canada, january–april 2021 |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8544957/ https://www.ncbi.nlm.nih.gov/pubmed/34388358 http://dx.doi.org/10.3201/eid2711.211190 |
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