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Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021

Several severe acute respiratory syndrome coronavirus 2 variants of concern (VOCs) emerged in late 2020; lineage B.1.1.7 initially dominated globally. However, lineages B.1.351 and P.1 represent potentially greater risk for transmission and immune escape. In British Columbia, Canada, B.1.1.7 and B.1...

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Autores principales: Hogan, Catherine A., Jassem, Agatha N., Sbihi, Hind, Joffres, Yayuk, Tyson, John R., Noftall, Kyle, Taylor, Marsha, Lee, Tracy, Fjell, Chris, Wilmer, Amanda, Galbraith, John, Romney, Marc G., Henry, Bonnie, Krajden, Mel, Galanis, Eleni, Prystajecky, Natalie, Hoang, Linda M.N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Centers for Disease Control and Prevention 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8544957/
https://www.ncbi.nlm.nih.gov/pubmed/34388358
http://dx.doi.org/10.3201/eid2711.211190
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author Hogan, Catherine A.
Jassem, Agatha N.
Sbihi, Hind
Joffres, Yayuk
Tyson, John R.
Noftall, Kyle
Taylor, Marsha
Lee, Tracy
Fjell, Chris
Wilmer, Amanda
Galbraith, John
Romney, Marc G.
Henry, Bonnie
Krajden, Mel
Galanis, Eleni
Prystajecky, Natalie
Hoang, Linda M.N.
author_facet Hogan, Catherine A.
Jassem, Agatha N.
Sbihi, Hind
Joffres, Yayuk
Tyson, John R.
Noftall, Kyle
Taylor, Marsha
Lee, Tracy
Fjell, Chris
Wilmer, Amanda
Galbraith, John
Romney, Marc G.
Henry, Bonnie
Krajden, Mel
Galanis, Eleni
Prystajecky, Natalie
Hoang, Linda M.N.
author_sort Hogan, Catherine A.
collection PubMed
description Several severe acute respiratory syndrome coronavirus 2 variants of concern (VOCs) emerged in late 2020; lineage B.1.1.7 initially dominated globally. However, lineages B.1.351 and P.1 represent potentially greater risk for transmission and immune escape. In British Columbia, Canada, B.1.1.7 and B.1.351 were first identified in December 2020 and P.1 in February 2021. We combined quantitative PCR and whole-genome sequencing to assess relative contribution of VOCs in nearly 67,000 infections during the first 16 weeks of 2021 in British Columbia. B.1.1.7 accounted for <10% of screened or sequenced specimens early on, increasing to >50% by week 8. P.1 accounted for <10% until week 10, increased rapidly to peak at week 12, and by week 13 codominated within 10% of rates of B.1.1.7. B.1.351 was a minority throughout. This rapid expansion of P.1 but suppression of B.1.351 expands our understanding of population-level VOC patterns and might provide clues to fitness determinants for emerging VOCs.
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spelling pubmed-85449572021-11-06 Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021 Hogan, Catherine A. Jassem, Agatha N. Sbihi, Hind Joffres, Yayuk Tyson, John R. Noftall, Kyle Taylor, Marsha Lee, Tracy Fjell, Chris Wilmer, Amanda Galbraith, John Romney, Marc G. Henry, Bonnie Krajden, Mel Galanis, Eleni Prystajecky, Natalie Hoang, Linda M.N. Emerg Infect Dis Research Several severe acute respiratory syndrome coronavirus 2 variants of concern (VOCs) emerged in late 2020; lineage B.1.1.7 initially dominated globally. However, lineages B.1.351 and P.1 represent potentially greater risk for transmission and immune escape. In British Columbia, Canada, B.1.1.7 and B.1.351 were first identified in December 2020 and P.1 in February 2021. We combined quantitative PCR and whole-genome sequencing to assess relative contribution of VOCs in nearly 67,000 infections during the first 16 weeks of 2021 in British Columbia. B.1.1.7 accounted for <10% of screened or sequenced specimens early on, increasing to >50% by week 8. P.1 accounted for <10% until week 10, increased rapidly to peak at week 12, and by week 13 codominated within 10% of rates of B.1.1.7. B.1.351 was a minority throughout. This rapid expansion of P.1 but suppression of B.1.351 expands our understanding of population-level VOC patterns and might provide clues to fitness determinants for emerging VOCs. Centers for Disease Control and Prevention 2021-11 /pmc/articles/PMC8544957/ /pubmed/34388358 http://dx.doi.org/10.3201/eid2711.211190 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited.
spellingShingle Research
Hogan, Catherine A.
Jassem, Agatha N.
Sbihi, Hind
Joffres, Yayuk
Tyson, John R.
Noftall, Kyle
Taylor, Marsha
Lee, Tracy
Fjell, Chris
Wilmer, Amanda
Galbraith, John
Romney, Marc G.
Henry, Bonnie
Krajden, Mel
Galanis, Eleni
Prystajecky, Natalie
Hoang, Linda M.N.
Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021
title Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021
title_full Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021
title_fullStr Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021
title_full_unstemmed Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021
title_short Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January–April 2021
title_sort rapid increase in sars-cov-2 p.1 lineage leading to codominance with b.1.1.7 lineage, british columbia, canada, january–april 2021
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8544957/
https://www.ncbi.nlm.nih.gov/pubmed/34388358
http://dx.doi.org/10.3201/eid2711.211190
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