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Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera

The global coronavirus disease 2019 (COVID-19) pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent-phase plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the severe acute respiratory syn...

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Autores principales: Oguntuyo, Kasopefoluwa Y., Stevens, Christian S., Hung, Chuan Tien, Ikegame, Satoshi, Acklin, Joshua A., Kowdle, Shreyas S., Carmichael, Jillian C., Chiu, Hsin-Ping, Azarm, Kristopher D., Haas, Griffin D., Amanat, Fatima, Klingler, Jéromine, Baine, Ian, Arinsburg, Suzanne, Bandres, Juan C., Siddiquey, Mohammed N. A., Schilke, Robert M., Woolard, Matthew D., Zhang, Hongbo, Duty, Andrew J., Kraus, Thomas A., Moran, Thomas M., Tortorella, Domenico, Lim, Jean K., Gamarnik, Andrea V., Hioe, Catarina E., Zolla-Pazner, Susan, Ivanov, Stanimir S., Kamil, Jeremy P., Krammer, Florian, Lee, Benhur
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8545089/
https://www.ncbi.nlm.nih.gov/pubmed/33593976
http://dx.doi.org/10.1128/mBio.02492-20
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author Oguntuyo, Kasopefoluwa Y.
Stevens, Christian S.
Hung, Chuan Tien
Ikegame, Satoshi
Acklin, Joshua A.
Kowdle, Shreyas S.
Carmichael, Jillian C.
Chiu, Hsin-Ping
Azarm, Kristopher D.
Haas, Griffin D.
Amanat, Fatima
Klingler, Jéromine
Baine, Ian
Arinsburg, Suzanne
Bandres, Juan C.
Siddiquey, Mohammed N. A.
Schilke, Robert M.
Woolard, Matthew D.
Zhang, Hongbo
Duty, Andrew J.
Kraus, Thomas A.
Moran, Thomas M.
Tortorella, Domenico
Lim, Jean K.
Gamarnik, Andrea V.
Hioe, Catarina E.
Zolla-Pazner, Susan
Ivanov, Stanimir S.
Kamil, Jeremy P.
Krammer, Florian
Lee, Benhur
author_facet Oguntuyo, Kasopefoluwa Y.
Stevens, Christian S.
Hung, Chuan Tien
Ikegame, Satoshi
Acklin, Joshua A.
Kowdle, Shreyas S.
Carmichael, Jillian C.
Chiu, Hsin-Ping
Azarm, Kristopher D.
Haas, Griffin D.
Amanat, Fatima
Klingler, Jéromine
Baine, Ian
Arinsburg, Suzanne
Bandres, Juan C.
Siddiquey, Mohammed N. A.
Schilke, Robert M.
Woolard, Matthew D.
Zhang, Hongbo
Duty, Andrew J.
Kraus, Thomas A.
Moran, Thomas M.
Tortorella, Domenico
Lim, Jean K.
Gamarnik, Andrea V.
Hioe, Catarina E.
Zolla-Pazner, Susan
Ivanov, Stanimir S.
Kamil, Jeremy P.
Krammer, Florian
Lee, Benhur
author_sort Oguntuyo, Kasopefoluwa Y.
collection PubMed
description The global coronavirus disease 2019 (COVID-19) pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent-phase plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike glycoprotein (CoV2-S). However, rigorous efficacy testing requires extensive screening with live virus under onerous biosafety level 3 (BSL3) conditions, which limits high-throughput screening of patient and vaccine sera. Myriad BSL2-compatible surrogate virus neutralization assays (VNAs) have been developed to overcome this barrier. Yet, there is marked variability between VNAs and how their results are presented, making intergroup comparisons difficult. To address these limitations, we developed a standardized VNA using CoV2-S pseudotyped particles (CoV2pp) based on vesicular stomatitis virus bearing the Renilla luciferase gene in place of its G glycoprotein (VSVΔG); this assay can be robustly produced at scale and generate accurate neutralizing titers within 18 h postinfection. Our standardized CoV2pp VNA showed a strong positive correlation with CoV2-S enzyme-linked immunosorbent assay (ELISA) results and live-virus neutralizations in confirmed convalescent-patient sera. Three independent groups subsequently validated our standardized CoV2pp VNA (n > 120). Our data (i) show that absolute 50% inhibitory concentration (absIC(50)), absIC(80), and absIC(90) values can be legitimately compared across diverse cohorts, (ii) highlight the substantial but consistent variability in neutralization potency across these cohorts, and (iii) support the use of the absIC(80) as a more meaningful metric for assessing the neutralization potency of a vaccine or convalescent-phase sera. Lastly, we used our CoV2pp in a screen to identify ultrapermissive 293T clones that stably express ACE2 or ACE2 plus TMPRSS2. When these are used in combination with our CoV2pp, we can produce CoV2pp sufficient for 150,000 standardized VNAs/week.
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spelling pubmed-85450892021-10-27 Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera Oguntuyo, Kasopefoluwa Y. Stevens, Christian S. Hung, Chuan Tien Ikegame, Satoshi Acklin, Joshua A. Kowdle, Shreyas S. Carmichael, Jillian C. Chiu, Hsin-Ping Azarm, Kristopher D. Haas, Griffin D. Amanat, Fatima Klingler, Jéromine Baine, Ian Arinsburg, Suzanne Bandres, Juan C. Siddiquey, Mohammed N. A. Schilke, Robert M. Woolard, Matthew D. Zhang, Hongbo Duty, Andrew J. Kraus, Thomas A. Moran, Thomas M. Tortorella, Domenico Lim, Jean K. Gamarnik, Andrea V. Hioe, Catarina E. Zolla-Pazner, Susan Ivanov, Stanimir S. Kamil, Jeremy P. Krammer, Florian Lee, Benhur mBio Research Article The global coronavirus disease 2019 (COVID-19) pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent-phase plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike glycoprotein (CoV2-S). However, rigorous efficacy testing requires extensive screening with live virus under onerous biosafety level 3 (BSL3) conditions, which limits high-throughput screening of patient and vaccine sera. Myriad BSL2-compatible surrogate virus neutralization assays (VNAs) have been developed to overcome this barrier. Yet, there is marked variability between VNAs and how their results are presented, making intergroup comparisons difficult. To address these limitations, we developed a standardized VNA using CoV2-S pseudotyped particles (CoV2pp) based on vesicular stomatitis virus bearing the Renilla luciferase gene in place of its G glycoprotein (VSVΔG); this assay can be robustly produced at scale and generate accurate neutralizing titers within 18 h postinfection. Our standardized CoV2pp VNA showed a strong positive correlation with CoV2-S enzyme-linked immunosorbent assay (ELISA) results and live-virus neutralizations in confirmed convalescent-patient sera. Three independent groups subsequently validated our standardized CoV2pp VNA (n > 120). Our data (i) show that absolute 50% inhibitory concentration (absIC(50)), absIC(80), and absIC(90) values can be legitimately compared across diverse cohorts, (ii) highlight the substantial but consistent variability in neutralization potency across these cohorts, and (iii) support the use of the absIC(80) as a more meaningful metric for assessing the neutralization potency of a vaccine or convalescent-phase sera. Lastly, we used our CoV2pp in a screen to identify ultrapermissive 293T clones that stably express ACE2 or ACE2 plus TMPRSS2. When these are used in combination with our CoV2pp, we can produce CoV2pp sufficient for 150,000 standardized VNAs/week. American Society for Microbiology 2021-02-16 /pmc/articles/PMC8545089/ /pubmed/33593976 http://dx.doi.org/10.1128/mBio.02492-20 Text en Copyright © 2021 Oguntuyo et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Oguntuyo, Kasopefoluwa Y.
Stevens, Christian S.
Hung, Chuan Tien
Ikegame, Satoshi
Acklin, Joshua A.
Kowdle, Shreyas S.
Carmichael, Jillian C.
Chiu, Hsin-Ping
Azarm, Kristopher D.
Haas, Griffin D.
Amanat, Fatima
Klingler, Jéromine
Baine, Ian
Arinsburg, Suzanne
Bandres, Juan C.
Siddiquey, Mohammed N. A.
Schilke, Robert M.
Woolard, Matthew D.
Zhang, Hongbo
Duty, Andrew J.
Kraus, Thomas A.
Moran, Thomas M.
Tortorella, Domenico
Lim, Jean K.
Gamarnik, Andrea V.
Hioe, Catarina E.
Zolla-Pazner, Susan
Ivanov, Stanimir S.
Kamil, Jeremy P.
Krammer, Florian
Lee, Benhur
Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera
title Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera
title_full Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera
title_fullStr Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera
title_full_unstemmed Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera
title_short Quantifying Absolute Neutralization Titers against SARS-CoV-2 by a Standardized Virus Neutralization Assay Allows for Cross-Cohort Comparisons of COVID-19 Sera
title_sort quantifying absolute neutralization titers against sars-cov-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of covid-19 sera
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8545089/
https://www.ncbi.nlm.nih.gov/pubmed/33593976
http://dx.doi.org/10.1128/mBio.02492-20
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