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Aging power spectrum of membrane protein transport and other subordinated random walks

Single-particle tracking offers detailed information about the motion of molecules in complex environments such as those encountered in live cells, but the interpretation of experimental data is challenging. One of the most powerful tools in the characterization of random processes is the power spec...

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Detalles Bibliográficos
Autores principales: Fox, Zachary R., Barkai, Eli, Krapf, Diego
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8546023/
https://www.ncbi.nlm.nih.gov/pubmed/34697310
http://dx.doi.org/10.1038/s41467-021-26465-8
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author Fox, Zachary R.
Barkai, Eli
Krapf, Diego
author_facet Fox, Zachary R.
Barkai, Eli
Krapf, Diego
author_sort Fox, Zachary R.
collection PubMed
description Single-particle tracking offers detailed information about the motion of molecules in complex environments such as those encountered in live cells, but the interpretation of experimental data is challenging. One of the most powerful tools in the characterization of random processes is the power spectral density. However, because anomalous diffusion processes in complex systems are usually not stationary, the traditional Wiener-Khinchin theorem for the analysis of power spectral densities is invalid. Here, we employ a recently developed tool named aging Wiener-Khinchin theorem to derive the power spectral density of fractional Brownian motion coexisting with a scale-free continuous time random walk, the two most typical anomalous diffusion processes. Using this analysis, we characterize the motion of voltage-gated sodium channels on the surface of hippocampal neurons. Our results show aging where the power spectral density can either increase or decrease with observation time depending on the specific parameters of both underlying processes.
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spelling pubmed-85460232021-10-29 Aging power spectrum of membrane protein transport and other subordinated random walks Fox, Zachary R. Barkai, Eli Krapf, Diego Nat Commun Article Single-particle tracking offers detailed information about the motion of molecules in complex environments such as those encountered in live cells, but the interpretation of experimental data is challenging. One of the most powerful tools in the characterization of random processes is the power spectral density. However, because anomalous diffusion processes in complex systems are usually not stationary, the traditional Wiener-Khinchin theorem for the analysis of power spectral densities is invalid. Here, we employ a recently developed tool named aging Wiener-Khinchin theorem to derive the power spectral density of fractional Brownian motion coexisting with a scale-free continuous time random walk, the two most typical anomalous diffusion processes. Using this analysis, we characterize the motion of voltage-gated sodium channels on the surface of hippocampal neurons. Our results show aging where the power spectral density can either increase or decrease with observation time depending on the specific parameters of both underlying processes. Nature Publishing Group UK 2021-10-25 /pmc/articles/PMC8546023/ /pubmed/34697310 http://dx.doi.org/10.1038/s41467-021-26465-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Fox, Zachary R.
Barkai, Eli
Krapf, Diego
Aging power spectrum of membrane protein transport and other subordinated random walks
title Aging power spectrum of membrane protein transport and other subordinated random walks
title_full Aging power spectrum of membrane protein transport and other subordinated random walks
title_fullStr Aging power spectrum of membrane protein transport and other subordinated random walks
title_full_unstemmed Aging power spectrum of membrane protein transport and other subordinated random walks
title_short Aging power spectrum of membrane protein transport and other subordinated random walks
title_sort aging power spectrum of membrane protein transport and other subordinated random walks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8546023/
https://www.ncbi.nlm.nih.gov/pubmed/34697310
http://dx.doi.org/10.1038/s41467-021-26465-8
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