Cargando…

Machine Learning Prediction and Experimental Validation of Antigenic Drift in H3 Influenza A Viruses in Swine

The antigenic diversity of influenza A viruses (IAV) circulating in swine challenges the development of effective vaccines, increasing zoonotic threat and pandemic potential. High-throughput sequencing technologies can quantify IAV genetic diversity, but there are no accurate approaches to adequatel...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zeller, Michael A., Gauger, Phillip C., Arendsee, Zebulun W., Souza, Carine K., Vincent, Amy L., Anderson, Tavis K.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8546707/ https://www.ncbi.nlm.nih.gov/pubmed/33731472 http://dx.doi.org/10.1128/mSphere.00920-20

Ejemplares similares

Swine-to-Ferret Transmission of Antigenically Drifted Contemporary Swine H3N2 Influenza A Virus Is an Indicator of Zoonotic Risk to Humans
por: Souza, Carine K., et al.
Publicado: (2023)

Reverse-zoonoses of 2009 H1N1 pandemic influenza A viruses and evolution in United States swine results in viruses with zoonotic potential
por: Markin, Alexey, et al.
Publicado: (2023)

Genetic and Antigenic Characterization of an Expanding H3 Influenza A Virus Clade in U.S. Swine Visualized by Nextstrain
por: Neveau, Megan N., et al.
Publicado: (2022)

Interspecies Transmission from Pigs to Ferrets of Antigenically Distinct Swine H1 Influenza A Viruses with Reduced Reactivity to Candidate Vaccine Virus Antisera as Measures of Relative Zoonotic Risk
por: Kimble, J. Brian, et al.
Publicado: (2022)

octoFLUshow: an Interactive Tool Describing Spatial and Temporal Trends in the Genetic Diversity of Influenza A Virus in U.S. Swine
por: Arendsee, Zebulun W., et al.
Publicado: (2021)

octoFLU: Automated Classification for the Evolutionary Origin of Influenza A Virus Gene Sequences Detected in U.S. Swine
por: Chang, Jennifer, et al.
Publicado: (2019)

Characterization of a 2016-2017 Human Seasonal H3 Influenza A Virus Spillover Now Endemic to U.S. Swine
por: Sharma, Aditi, et al.
Publicado: (2022)

Spatial and temporal coevolution of N2 neuraminidase and H1 and H3 hemagglutinin genes of influenza A virus in US swine
por: Zeller, Michael A, et al.
Publicado: (2021)

ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine
por: Zeller, Michael A, et al.
Publicado: (2018)

Complete Genome Sequences of Two Novel Human-Like H3N2 Influenza A Viruses, A/swine/Oklahoma/65980/2017 (H3N2) and A/Swine/Oklahoma/65260/2017 (H3N2), Detected in Swine in the United States
por: Zeller, Michael A., et al.
Publicado: (2018)

The avian‐origin H3N2 canine influenza virus that recently emerged in the United States has limited replication in swine
por: Abente, Eugenio J., et al.
Publicado: (2016)

Antigenic evolution of H3N2 influenza A viruses in swine in the United States from 2012 to 2016
por: Bolton, Marcus J., et al.
Publicado: (2018)

Antigenic Characterization and Pandemic Risk Assessment of North American H1 Influenza A Viruses Circulating in Swine
por: Venkatesh, Divya, et al.
Publicado: (2022)

Substantial Antigenic Drift in the Hemagglutinin Protein of Swine Influenza A Viruses
por: Ryt-Hansen, Pia, et al.
Publicado: (2020)

Regional patterns of genetic diversity in swine influenza A viruses in the United States from 2010 to 2016
por: Walia, Rasna R., et al.
Publicado: (2019)

Changes in the Hemagglutinin and Internal Gene Segments Were Needed for Human Seasonal H3 Influenza A Virus to Efficiently Infect and Replicate in Swine
por: Rajao, Daniela S., et al.
Publicado: (2022)

The global antigenic diversity of swine influenza A viruses
por: Lewis, Nicola S, et al.
Publicado: (2016)

Landscape of the Dark Transcriptome Revealed Through Re-mining Massive RNA-Seq Data
por: Li, Jing, et al.
Publicado: (2021)

The antigenic evolution of influenza: drift or thrift?
por: Wikramaratna, Paul S., et al.
Publicado: (2013)

Vaccination against swine influenza in pigs causes different drift evolutionary patterns upon swine influenza virus experimental infection and reduces the likelihood of genomic reassortments
por: López-Valiñas, Álvaro, et al.
Publicado: (2023)

Human-to-swine introductions and onward transmission of 2009 H1N1 pandemic influenza viruses in Brazil
por: Junqueira, Dennis Maletich, et al.
Publicado: (2023)

Susceptibility of swine to H5 and H7 low pathogenic avian influenza viruses
por: Balzli, Charles, et al.
Publicado: (2016)

Phylogenomic Distance Method for Analyzing Transcriptome Evolution Based on RNA-seq Data
por: Gu, Xun, et al.
Publicado: (2013)

Influenza A Virus Field Surveillance at a Swine-Human Interface
por: Rambo-Martin, Benjamin L., et al.
Publicado: (2020)

Modeling Influenza Antigenic Shift and Drift with LEGO Bricks
por: Marintcheva, Boriana
Publicado: (2016)

Antigenic drift and epidemiological severity of seasonal influenza in Canada
por: Chen, Zishu, et al.
Publicado: (2022)

fagin: synteny-based phylostratigraphy and finer classification of young genes
por: Arendsee, Zebulun, et al.
Publicado: (2019)

Comparison of Human-Like H1 (δ-Cluster) Influenza A Viruses in the Swine Host
por: Ciacci Zanella, Janice R., et al.
Publicado: (2012)

Introductions of Human-Origin Seasonal H3N2, H1N2 and Pre-2009 H1N1 Influenza Viruses to Swine in Brazil
por: Tochetto, Caroline, et al.
Publicado: (2023)

Immune Escape Adaptive Mutations in Hemagglutinin Are Responsible for the Antigenic Drift of Eurasian Avian-Like H1N1 Swine Influenza Viruses
por: Xu, Chengzhi, et al.
Publicado: (2022)

Foster thy young: enhanced prediction of orphan genes in assembled genomes
por: Li, Jing, et al.
Publicado: (2021)

Veterinarian perceptions and practices in prevention and control of influenza virus in the Midwest United States swine farms
por: Moraes, Daniel C. A., et al.
Publicado: (2023)

Natural and directed antigenic drift of the H1 influenza virus hemagglutinin stalk domain
por: Anderson, Christopher S., et al.
Publicado: (2017)

Human-Origin Influenza A(H3N2) Reassortant Viruses in Swine, Southeast Mexico
por: Nelson, Martha I., et al.
Publicado: (2019)

Adaptation of Human Influenza Viruses to Swine
por: Rajao, Daniela S., et al.
Publicado: (2019)

A deterministic model for influenza infection with multiple strains and antigenic drift
por: Alfaro-Murillo, Jorge A., et al.
Publicado: (2013)

Global circulation patterns of seasonal influenza viruses vary with antigenic drift
por: Bedford, Trevor, et al.
Publicado: (2015)

SWINE INFLUENZA : I. EXPERIMENTAL TRANSMISSION AND PATHOLOGY
por: Shope, Richard E.
Publicado: (1931)

STUDIES ON INFLUENZA VIRUS : THE COMPLEMENT-FIXING ANTIGEN OF INFLUENZA A AND SWINE INFLUENZA VIRUSES
por: Lennette, Edwin H., et al.
Publicado: (1941)

Influenza Vaccine Effectiveness Against Antigenically Drifted Influenza Higher Than Expected in Hospitalized Adults: 2014–2015
por: Petrie, Joshua G., et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_ndktk9jp4hvn7tb0v9q82ldkch