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The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China
Arcangelisia gusanlung H.S.Lo is widely used as a folk medicine by the Dai and Li peoples. Here, we report the first complete chloroplast (cp) genome sequence for this species based on Illumina paired-end sequencing data. The cp genome was 162,509 bp in length with a small single-copy (SSC) region o...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8547845/ https://www.ncbi.nlm.nih.gov/pubmed/34712807 http://dx.doi.org/10.1080/23802359.2021.1993099 |
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author | Wen, Guihua Chen, Sheng Fan, Lingling Zeng, Lei Xu, Bingqiang |
author_facet | Wen, Guihua Chen, Sheng Fan, Lingling Zeng, Lei Xu, Bingqiang |
author_sort | Wen, Guihua |
collection | PubMed |
description | Arcangelisia gusanlung H.S.Lo is widely used as a folk medicine by the Dai and Li peoples. Here, we report the first complete chloroplast (cp) genome sequence for this species based on Illumina paired-end sequencing data. The cp genome was 162,509 bp in length with a small single-copy (SSC) region of 20,852 bp, a large single-copy (LSC) region of 91,449 bp, and two separated inverted region of 25,104 bp. In total, 129 unique genes were identified of this genome, including 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The GC contents of this genome is 37.8%. Phylogenetic analysis based on 13 complete cp genomes showed a strong sister relationship with Tinospora cordifolia (Willd.) Miers and Tinospora sinensis (Lour.) Merr. This complete genome of A. gusanlung will provide valuable information to elucidate the mechanism of speciation of Arcangelisia Becc. |
format | Online Article Text |
id | pubmed-8547845 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-85478452021-10-27 The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China Wen, Guihua Chen, Sheng Fan, Lingling Zeng, Lei Xu, Bingqiang Mitochondrial DNA B Resour Rapid Communication Arcangelisia gusanlung H.S.Lo is widely used as a folk medicine by the Dai and Li peoples. Here, we report the first complete chloroplast (cp) genome sequence for this species based on Illumina paired-end sequencing data. The cp genome was 162,509 bp in length with a small single-copy (SSC) region of 20,852 bp, a large single-copy (LSC) region of 91,449 bp, and two separated inverted region of 25,104 bp. In total, 129 unique genes were identified of this genome, including 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The GC contents of this genome is 37.8%. Phylogenetic analysis based on 13 complete cp genomes showed a strong sister relationship with Tinospora cordifolia (Willd.) Miers and Tinospora sinensis (Lour.) Merr. This complete genome of A. gusanlung will provide valuable information to elucidate the mechanism of speciation of Arcangelisia Becc. Taylor & Francis 2021-10-23 /pmc/articles/PMC8547845/ /pubmed/34712807 http://dx.doi.org/10.1080/23802359.2021.1993099 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Rapid Communication Wen, Guihua Chen, Sheng Fan, Lingling Zeng, Lei Xu, Bingqiang The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China |
title | The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China |
title_full | The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China |
title_fullStr | The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China |
title_full_unstemmed | The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China |
title_short | The complete chloroplast genome of Arcangelisia gusanlung H.S.Lo (Menispermaceae), an important traditional medicine from South China |
title_sort | complete chloroplast genome of arcangelisia gusanlung h.s.lo (menispermaceae), an important traditional medicine from south china |
topic | Rapid Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8547845/ https://www.ncbi.nlm.nih.gov/pubmed/34712807 http://dx.doi.org/10.1080/23802359.2021.1993099 |
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