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The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae
Arisaema bockii Engler is a perennial herbaceous medicinal plant, which is widely distributed in many provinces in China such as Anhui, Jiangsu, and Zhejiang. In this study, the complete chloroplast genome sequence of A. bockii was assembled and characterized based on high-throughput sequencing data...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8547865/ https://www.ncbi.nlm.nih.gov/pubmed/34712813 http://dx.doi.org/10.1080/23802359.2021.1993107 |
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author | Yi, Shanyong Xu, Tao Song, Xiangwen Wang, Wei Wang, Guanglin Yu, Wangyang Han, Bangxing |
author_facet | Yi, Shanyong Xu, Tao Song, Xiangwen Wang, Wei Wang, Guanglin Yu, Wangyang Han, Bangxing |
author_sort | Yi, Shanyong |
collection | PubMed |
description | Arisaema bockii Engler is a perennial herbaceous medicinal plant, which is widely distributed in many provinces in China such as Anhui, Jiangsu, and Zhejiang. In this study, the complete chloroplast genome sequence of A. bockii was assembled and characterized based on high-throughput sequencing data. The total length of chloroplast genome was 175,537 bp, including large single-copy (LSC) and small single-copy (SSC) regions of 98,870 bp and 23,345 bp, respectively, which were separated by a pair of 27,161 bp inverted repeat (IR) regions. The genome contained 129 genes, including 84 protein-coding genes, 36 tRNA genes, 8 rRNA genes, and one pseudogene. The overall GC content of the genome was 33.6%. A phylogenetic tree reconstructed by 30 chloroplast genomes revealed that A. bockii was mostly related to the same genus species A. ringens, A. franchetianum and A. erubescens. The work reported the first complete chloroplast genome of A. bockii, which may provide some useful information to the evolution of the family Araceae. |
format | Online Article Text |
id | pubmed-8547865 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-85478652021-10-27 The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae Yi, Shanyong Xu, Tao Song, Xiangwen Wang, Wei Wang, Guanglin Yu, Wangyang Han, Bangxing Mitochondrial DNA B Resour Mitogenome Announcement Arisaema bockii Engler is a perennial herbaceous medicinal plant, which is widely distributed in many provinces in China such as Anhui, Jiangsu, and Zhejiang. In this study, the complete chloroplast genome sequence of A. bockii was assembled and characterized based on high-throughput sequencing data. The total length of chloroplast genome was 175,537 bp, including large single-copy (LSC) and small single-copy (SSC) regions of 98,870 bp and 23,345 bp, respectively, which were separated by a pair of 27,161 bp inverted repeat (IR) regions. The genome contained 129 genes, including 84 protein-coding genes, 36 tRNA genes, 8 rRNA genes, and one pseudogene. The overall GC content of the genome was 33.6%. A phylogenetic tree reconstructed by 30 chloroplast genomes revealed that A. bockii was mostly related to the same genus species A. ringens, A. franchetianum and A. erubescens. The work reported the first complete chloroplast genome of A. bockii, which may provide some useful information to the evolution of the family Araceae. Taylor & Francis 2021-10-23 /pmc/articles/PMC8547865/ /pubmed/34712813 http://dx.doi.org/10.1080/23802359.2021.1993107 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Yi, Shanyong Xu, Tao Song, Xiangwen Wang, Wei Wang, Guanglin Yu, Wangyang Han, Bangxing The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae |
title | The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae |
title_full | The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae |
title_fullStr | The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae |
title_full_unstemmed | The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae |
title_short | The complete chloroplast genome of Arisaema bockii Engler and its phylogenetic analysis in the family Araceae |
title_sort | complete chloroplast genome of arisaema bockii engler and its phylogenetic analysis in the family araceae |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8547865/ https://www.ncbi.nlm.nih.gov/pubmed/34712813 http://dx.doi.org/10.1080/23802359.2021.1993107 |
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