Cargando…
Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer
BACKGROUND: Ferroptosis is a newly discovered mode of cell death distinct from apoptosis and necrosis, and its activation contributes to anticancer therapy in a variety of cancers. However, the prognostic value of ferroptosis-related genes in non-small cell lung cancer (NSCLC) remains to be further...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549233/ https://www.ncbi.nlm.nih.gov/pubmed/34702254 http://dx.doi.org/10.1186/s12935-021-02267-2 |
_version_ | 1784590743132700672 |
---|---|
author | Huang, Fangfang Zheng, Yushi Li, Xiaoling Luo, Hui Luo, Lianxiang |
author_facet | Huang, Fangfang Zheng, Yushi Li, Xiaoling Luo, Hui Luo, Lianxiang |
author_sort | Huang, Fangfang |
collection | PubMed |
description | BACKGROUND: Ferroptosis is a newly discovered mode of cell death distinct from apoptosis and necrosis, and its activation contributes to anticancer therapy in a variety of cancers. However, the prognostic value of ferroptosis-related genes in non-small cell lung cancer (NSCLC) remains to be further investigated. METHODS: NSCLC transcriptome mRNA-seq data set and corresponding clinical data set were downloaded from the Cancer Genome Atlas (TCGA). Then, bioinformatics approaches were subsequently employed to identify potential prognostic markers. Finally, the effects of candidate markers on NSCLC cell proliferation, migration, and ferroptosis were assessed by CCK8, colony formation, wound-healing assay, and functional assays related to ferroptosis. RESULTS: A total of 37 common differentially expressed genes were screened based TCGA database. Six overall survival associated genes (ENPP2, ULK1, CP, LURAP1L, HIC1, AKR1C1) were selected to build survival model, of which hub gene AKR1C1 was with high expression and low ferroptosis level in NSCLC tumor. Further research showed that AKR1C1 was related with many pathways involved in the process of ferroptosis and associated with diverse cancer-infiltrating immune cells. Moreover, the results of in vitro experiments indicated that the expression of AKR1C1 was upregulated in NSCLC cell lines, and silencing AKR1C1 can inhibit the proliferation and migration of NSCLC cells and promote the occurrence of ferroptosis. CONCLUSIONS: Our study revealed the potential role of ferroptosis-related gene AKR1C1 in NSCLC, which can be used for prognostic prediction in NSCLC. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12935-021-02267-2. |
format | Online Article Text |
id | pubmed-8549233 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-85492332021-10-27 Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer Huang, Fangfang Zheng, Yushi Li, Xiaoling Luo, Hui Luo, Lianxiang Cancer Cell Int Primary Research BACKGROUND: Ferroptosis is a newly discovered mode of cell death distinct from apoptosis and necrosis, and its activation contributes to anticancer therapy in a variety of cancers. However, the prognostic value of ferroptosis-related genes in non-small cell lung cancer (NSCLC) remains to be further investigated. METHODS: NSCLC transcriptome mRNA-seq data set and corresponding clinical data set were downloaded from the Cancer Genome Atlas (TCGA). Then, bioinformatics approaches were subsequently employed to identify potential prognostic markers. Finally, the effects of candidate markers on NSCLC cell proliferation, migration, and ferroptosis were assessed by CCK8, colony formation, wound-healing assay, and functional assays related to ferroptosis. RESULTS: A total of 37 common differentially expressed genes were screened based TCGA database. Six overall survival associated genes (ENPP2, ULK1, CP, LURAP1L, HIC1, AKR1C1) were selected to build survival model, of which hub gene AKR1C1 was with high expression and low ferroptosis level in NSCLC tumor. Further research showed that AKR1C1 was related with many pathways involved in the process of ferroptosis and associated with diverse cancer-infiltrating immune cells. Moreover, the results of in vitro experiments indicated that the expression of AKR1C1 was upregulated in NSCLC cell lines, and silencing AKR1C1 can inhibit the proliferation and migration of NSCLC cells and promote the occurrence of ferroptosis. CONCLUSIONS: Our study revealed the potential role of ferroptosis-related gene AKR1C1 in NSCLC, which can be used for prognostic prediction in NSCLC. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12935-021-02267-2. BioMed Central 2021-10-26 /pmc/articles/PMC8549233/ /pubmed/34702254 http://dx.doi.org/10.1186/s12935-021-02267-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Primary Research Huang, Fangfang Zheng, Yushi Li, Xiaoling Luo, Hui Luo, Lianxiang Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer |
title | Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer |
title_full | Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer |
title_fullStr | Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer |
title_full_unstemmed | Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer |
title_short | Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer |
title_sort | ferroptosis-related gene akr1c1 predicts the prognosis of non-small cell lung cancer |
topic | Primary Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549233/ https://www.ncbi.nlm.nih.gov/pubmed/34702254 http://dx.doi.org/10.1186/s12935-021-02267-2 |
work_keys_str_mv | AT huangfangfang ferroptosisrelatedgeneakr1c1predictstheprognosisofnonsmallcelllungcancer AT zhengyushi ferroptosisrelatedgeneakr1c1predictstheprognosisofnonsmallcelllungcancer AT lixiaoling ferroptosisrelatedgeneakr1c1predictstheprognosisofnonsmallcelllungcancer AT luohui ferroptosisrelatedgeneakr1c1predictstheprognosisofnonsmallcelllungcancer AT luolianxiang ferroptosisrelatedgeneakr1c1predictstheprognosisofnonsmallcelllungcancer |