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Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems
A polyphasic taxonomic study was conducted on three strains isolated from drinking water systems that had previously been deposited as Chryseobacterium species at the Spanish Type Culture Collection in order to complete their classification. Strains CECT 9293(T), CECT 9390(T) and CECT 9393(T) were i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Microbiology Society
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549270/ https://www.ncbi.nlm.nih.gov/pubmed/34569922 http://dx.doi.org/10.1099/ijsem.0.005020 |
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author | Lucena, Teresa Ruvira, María A. Macián, M. Carmen Arahal, David R. Aznar, Rosa Pujalte, María J. |
author_facet | Lucena, Teresa Ruvira, María A. Macián, M. Carmen Arahal, David R. Aznar, Rosa Pujalte, María J. |
author_sort | Lucena, Teresa |
collection | PubMed |
description | A polyphasic taxonomic study was conducted on three strains isolated from drinking water systems that had previously been deposited as Chryseobacterium species at the Spanish Type Culture Collection in order to complete their classification. Strains CECT 9293(T), CECT 9390(T) and CECT 9393(T) were isolated from sites in Barcelona, Spain, in the framework of a project aimed at generating the first MALDI-TOF database specific for bacteria present in water for human consumption. Their partial 16S rRNA sequences showed that their closest relatives among the type strains of Chryseobacterium exhibited 98 % similarity or less, supporting their taxonomic novelty. At the same time, comparison between them revealed that strains CECT 9293(T) and CECT 9393(T) could perhaps be related at the species level as they shared 99.5 % similarity. However, whole genome sequencing was performed and the subsequent calculation of relatedness indices, average nucleotide identity and estimated DNA–DNA hybridization, ruled out that possibility and confirmed instead that each of the strains should be considered a separate species in the genus Chryseobacterium . Having clarified their status, we also performed phylogenomic analyses and searched for possible environmental or non-type material sequences that could be related to any of them at the species level. In parallel, the strains were characterized phenotypically and compared to their closest relatives to determine diagnostic traits to support their formal proposal. The proposed species are Chryseobacterium potabilaquae sp. nov. with the type strain CECT 9293(T) (=LMG 32084(T)), Chryseobacterium aquaeductus sp. nov. with the type strain CECT 9390(T) (=LMG 32085(T)) and Chryseobacterium fistulae sp. nov. with the type strain CECT 9393(T) (=LMG 32086(T)). |
format | Online Article Text |
id | pubmed-8549270 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Microbiology Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-85492702021-10-28 Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems Lucena, Teresa Ruvira, María A. Macián, M. Carmen Arahal, David R. Aznar, Rosa Pujalte, María J. Int J Syst Evol Microbiol New Taxa A polyphasic taxonomic study was conducted on three strains isolated from drinking water systems that had previously been deposited as Chryseobacterium species at the Spanish Type Culture Collection in order to complete their classification. Strains CECT 9293(T), CECT 9390(T) and CECT 9393(T) were isolated from sites in Barcelona, Spain, in the framework of a project aimed at generating the first MALDI-TOF database specific for bacteria present in water for human consumption. Their partial 16S rRNA sequences showed that their closest relatives among the type strains of Chryseobacterium exhibited 98 % similarity or less, supporting their taxonomic novelty. At the same time, comparison between them revealed that strains CECT 9293(T) and CECT 9393(T) could perhaps be related at the species level as they shared 99.5 % similarity. However, whole genome sequencing was performed and the subsequent calculation of relatedness indices, average nucleotide identity and estimated DNA–DNA hybridization, ruled out that possibility and confirmed instead that each of the strains should be considered a separate species in the genus Chryseobacterium . Having clarified their status, we also performed phylogenomic analyses and searched for possible environmental or non-type material sequences that could be related to any of them at the species level. In parallel, the strains were characterized phenotypically and compared to their closest relatives to determine diagnostic traits to support their formal proposal. The proposed species are Chryseobacterium potabilaquae sp. nov. with the type strain CECT 9293(T) (=LMG 32084(T)), Chryseobacterium aquaeductus sp. nov. with the type strain CECT 9390(T) (=LMG 32085(T)) and Chryseobacterium fistulae sp. nov. with the type strain CECT 9393(T) (=LMG 32086(T)). Microbiology Society 2021-09-27 /pmc/articles/PMC8549270/ /pubmed/34569922 http://dx.doi.org/10.1099/ijsem.0.005020 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License. |
spellingShingle | New Taxa Lucena, Teresa Ruvira, María A. Macián, M. Carmen Arahal, David R. Aznar, Rosa Pujalte, María J. Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems |
title |
Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems |
title_full |
Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems |
title_fullStr |
Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems |
title_full_unstemmed |
Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems |
title_short |
Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems |
title_sort | chryseobacterium potabilaquae sp. nov., chryseobacterium aquaeductus sp. nov. and chryseobacterium fistulae sp. nov., from drinking water systems |
topic | New Taxa |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549270/ https://www.ncbi.nlm.nih.gov/pubmed/34569922 http://dx.doi.org/10.1099/ijsem.0.005020 |
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