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Improved approximate rips filtrations with shifted integer lattices and cubical complexes
Rips complexes are important structures for analyzing topological features of metric spaces. Unfortunately, generating these complexes is expensive because of a combinatorial explosion in the complex size. For n points in [Formula: see text] , we present a scheme to construct a 2-approximation of th...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549989/ https://www.ncbi.nlm.nih.gov/pubmed/34722862 http://dx.doi.org/10.1007/s41468-021-00072-4 |
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author | Choudhary, Aruni Kerber, Michael Raghvendra, Sharath |
author_facet | Choudhary, Aruni Kerber, Michael Raghvendra, Sharath |
author_sort | Choudhary, Aruni |
collection | PubMed |
description | Rips complexes are important structures for analyzing topological features of metric spaces. Unfortunately, generating these complexes is expensive because of a combinatorial explosion in the complex size. For n points in [Formula: see text] , we present a scheme to construct a 2-approximation of the filtration of the Rips complex in the [Formula: see text] -norm, which extends to a [Formula: see text] -approximation in the Euclidean case. The k-skeleton of the resulting approximation has a total size of [Formula: see text] . The scheme is based on the integer lattice and simplicial complexes based on the barycentric subdivision of the d-cube. We extend our result to use cubical complexes in place of simplicial complexes by introducing cubical maps between complexes. We get the same approximation guarantee as the simplicial case, while reducing the total size of the approximation to only [Formula: see text] (cubical) cells. There are two novel techniques that we use in this paper. The first is the use of acyclic carriers for proving our approximation result. In our application, these are maps which relate the Rips complex and the approximation in a relatively simple manner and greatly reduce the complexity of showing the approximation guarantee. The second technique is what we refer to as scale balancing, which is a simple trick to improve the approximation ratio under certain conditions. |
format | Online Article Text |
id | pubmed-8549989 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-85499892021-10-29 Improved approximate rips filtrations with shifted integer lattices and cubical complexes Choudhary, Aruni Kerber, Michael Raghvendra, Sharath J Appl Comput Topol Article Rips complexes are important structures for analyzing topological features of metric spaces. Unfortunately, generating these complexes is expensive because of a combinatorial explosion in the complex size. For n points in [Formula: see text] , we present a scheme to construct a 2-approximation of the filtration of the Rips complex in the [Formula: see text] -norm, which extends to a [Formula: see text] -approximation in the Euclidean case. The k-skeleton of the resulting approximation has a total size of [Formula: see text] . The scheme is based on the integer lattice and simplicial complexes based on the barycentric subdivision of the d-cube. We extend our result to use cubical complexes in place of simplicial complexes by introducing cubical maps between complexes. We get the same approximation guarantee as the simplicial case, while reducing the total size of the approximation to only [Formula: see text] (cubical) cells. There are two novel techniques that we use in this paper. The first is the use of acyclic carriers for proving our approximation result. In our application, these are maps which relate the Rips complex and the approximation in a relatively simple manner and greatly reduce the complexity of showing the approximation guarantee. The second technique is what we refer to as scale balancing, which is a simple trick to improve the approximation ratio under certain conditions. Springer International Publishing 2021-05-15 2021 /pmc/articles/PMC8549989/ /pubmed/34722862 http://dx.doi.org/10.1007/s41468-021-00072-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Choudhary, Aruni Kerber, Michael Raghvendra, Sharath Improved approximate rips filtrations with shifted integer lattices and cubical complexes |
title | Improved approximate rips filtrations with shifted integer lattices and cubical complexes |
title_full | Improved approximate rips filtrations with shifted integer lattices and cubical complexes |
title_fullStr | Improved approximate rips filtrations with shifted integer lattices and cubical complexes |
title_full_unstemmed | Improved approximate rips filtrations with shifted integer lattices and cubical complexes |
title_short | Improved approximate rips filtrations with shifted integer lattices and cubical complexes |
title_sort | improved approximate rips filtrations with shifted integer lattices and cubical complexes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549989/ https://www.ncbi.nlm.nih.gov/pubmed/34722862 http://dx.doi.org/10.1007/s41468-021-00072-4 |
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