Cargando…

Improved approximate rips filtrations with shifted integer lattices and cubical complexes

Rips complexes are important structures for analyzing topological features of metric spaces. Unfortunately, generating these complexes is expensive because of a combinatorial explosion in the complex size. For n points in [Formula: see text] , we present a scheme to construct a 2-approximation of th...

Descripción completa

Detalles Bibliográficos
Autores principales: Choudhary, Aruni, Kerber, Michael, Raghvendra, Sharath
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549989/
https://www.ncbi.nlm.nih.gov/pubmed/34722862
http://dx.doi.org/10.1007/s41468-021-00072-4
_version_ 1784590869063532544
author Choudhary, Aruni
Kerber, Michael
Raghvendra, Sharath
author_facet Choudhary, Aruni
Kerber, Michael
Raghvendra, Sharath
author_sort Choudhary, Aruni
collection PubMed
description Rips complexes are important structures for analyzing topological features of metric spaces. Unfortunately, generating these complexes is expensive because of a combinatorial explosion in the complex size. For n points in [Formula: see text] , we present a scheme to construct a 2-approximation of the filtration of the Rips complex in the [Formula: see text] -norm, which extends to a [Formula: see text] -approximation in the Euclidean case. The k-skeleton of the resulting approximation has a total size of [Formula: see text] . The scheme is based on the integer lattice and simplicial complexes based on the barycentric subdivision of the d-cube. We extend our result to use cubical complexes in place of simplicial complexes by introducing cubical maps between complexes. We get the same approximation guarantee as the simplicial case, while reducing the total size of the approximation to only [Formula: see text] (cubical) cells. There are two novel techniques that we use in this paper. The first is the use of acyclic carriers for proving our approximation result. In our application, these are maps which relate the Rips complex and the approximation in a relatively simple manner and greatly reduce the complexity of showing the approximation guarantee. The second technique is what we refer to as scale balancing, which is a simple trick to improve the approximation ratio under certain conditions.
format Online
Article
Text
id pubmed-8549989
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Springer International Publishing
record_format MEDLINE/PubMed
spelling pubmed-85499892021-10-29 Improved approximate rips filtrations with shifted integer lattices and cubical complexes Choudhary, Aruni Kerber, Michael Raghvendra, Sharath J Appl Comput Topol Article Rips complexes are important structures for analyzing topological features of metric spaces. Unfortunately, generating these complexes is expensive because of a combinatorial explosion in the complex size. For n points in [Formula: see text] , we present a scheme to construct a 2-approximation of the filtration of the Rips complex in the [Formula: see text] -norm, which extends to a [Formula: see text] -approximation in the Euclidean case. The k-skeleton of the resulting approximation has a total size of [Formula: see text] . The scheme is based on the integer lattice and simplicial complexes based on the barycentric subdivision of the d-cube. We extend our result to use cubical complexes in place of simplicial complexes by introducing cubical maps between complexes. We get the same approximation guarantee as the simplicial case, while reducing the total size of the approximation to only [Formula: see text] (cubical) cells. There are two novel techniques that we use in this paper. The first is the use of acyclic carriers for proving our approximation result. In our application, these are maps which relate the Rips complex and the approximation in a relatively simple manner and greatly reduce the complexity of showing the approximation guarantee. The second technique is what we refer to as scale balancing, which is a simple trick to improve the approximation ratio under certain conditions. Springer International Publishing 2021-05-15 2021 /pmc/articles/PMC8549989/ /pubmed/34722862 http://dx.doi.org/10.1007/s41468-021-00072-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Choudhary, Aruni
Kerber, Michael
Raghvendra, Sharath
Improved approximate rips filtrations with shifted integer lattices and cubical complexes
title Improved approximate rips filtrations with shifted integer lattices and cubical complexes
title_full Improved approximate rips filtrations with shifted integer lattices and cubical complexes
title_fullStr Improved approximate rips filtrations with shifted integer lattices and cubical complexes
title_full_unstemmed Improved approximate rips filtrations with shifted integer lattices and cubical complexes
title_short Improved approximate rips filtrations with shifted integer lattices and cubical complexes
title_sort improved approximate rips filtrations with shifted integer lattices and cubical complexes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8549989/
https://www.ncbi.nlm.nih.gov/pubmed/34722862
http://dx.doi.org/10.1007/s41468-021-00072-4
work_keys_str_mv AT choudharyaruni improvedapproximateripsfiltrationswithshiftedintegerlatticesandcubicalcomplexes
AT kerbermichael improvedapproximateripsfiltrationswithshiftedintegerlatticesandcubicalcomplexes
AT raghvendrasharath improvedapproximateripsfiltrationswithshiftedintegerlatticesandcubicalcomplexes