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Learning Extremal Representations with Deep Archetypal Analysis

Archetypes represent extreme manifestations of a population with respect to specific characteristic traits or features. In linear feature space, archetypes approximate the data convex hull allowing all data points to be expressed as convex mixtures of archetypes. As mixing of archetypes is performed...

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Autores principales: Keller, Sebastian Mathias, Samarin, Maxim, Arend Torres, Fabricio, Wieser, Mario, Roth, Volker
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8550171/
https://www.ncbi.nlm.nih.gov/pubmed/34720403
http://dx.doi.org/10.1007/s11263-020-01390-3
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author Keller, Sebastian Mathias
Samarin, Maxim
Arend Torres, Fabricio
Wieser, Mario
Roth, Volker
author_facet Keller, Sebastian Mathias
Samarin, Maxim
Arend Torres, Fabricio
Wieser, Mario
Roth, Volker
author_sort Keller, Sebastian Mathias
collection PubMed
description Archetypes represent extreme manifestations of a population with respect to specific characteristic traits or features. In linear feature space, archetypes approximate the data convex hull allowing all data points to be expressed as convex mixtures of archetypes. As mixing of archetypes is performed directly on the input data, linear Archetypal Analysis requires additivity of the input, which is a strong assumption unlikely to hold e.g. in case of image data. To address this problem, we propose learning an appropriate latent feature space while simultaneously identifying suitable archetypes. We thus introduce a generative formulation of the linear archetype model, parameterized by neural networks. By introducing the distance-dependent archetype loss, the linear archetype model can be integrated into the latent space of a deep variational information bottleneck and an optimal representation, together with the archetypes, can be learned end-to-end. Moreover, the information bottleneck framework allows for a natural incorporation of arbitrarily complex side information during training. As a consequence, learned archetypes become easily interpretable as they derive their meaning directly from the included side information. Applicability of the proposed method is demonstrated by exploring archetypes of female facial expressions while using multi-rater based emotion scores of these expressions as side information. A second application illustrates the exploration of the chemical space of small organic molecules. By using different kinds of side information we demonstrate how identified archetypes, along with their interpretation, largely depend on the side information provided. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11263-020-01390-3.
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spelling pubmed-85501712021-10-29 Learning Extremal Representations with Deep Archetypal Analysis Keller, Sebastian Mathias Samarin, Maxim Arend Torres, Fabricio Wieser, Mario Roth, Volker Int J Comput Vis Article Archetypes represent extreme manifestations of a population with respect to specific characteristic traits or features. In linear feature space, archetypes approximate the data convex hull allowing all data points to be expressed as convex mixtures of archetypes. As mixing of archetypes is performed directly on the input data, linear Archetypal Analysis requires additivity of the input, which is a strong assumption unlikely to hold e.g. in case of image data. To address this problem, we propose learning an appropriate latent feature space while simultaneously identifying suitable archetypes. We thus introduce a generative formulation of the linear archetype model, parameterized by neural networks. By introducing the distance-dependent archetype loss, the linear archetype model can be integrated into the latent space of a deep variational information bottleneck and an optimal representation, together with the archetypes, can be learned end-to-end. Moreover, the information bottleneck framework allows for a natural incorporation of arbitrarily complex side information during training. As a consequence, learned archetypes become easily interpretable as they derive their meaning directly from the included side information. Applicability of the proposed method is demonstrated by exploring archetypes of female facial expressions while using multi-rater based emotion scores of these expressions as side information. A second application illustrates the exploration of the chemical space of small organic molecules. By using different kinds of side information we demonstrate how identified archetypes, along with their interpretation, largely depend on the side information provided. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11263-020-01390-3. Springer US 2020-12-23 2021 /pmc/articles/PMC8550171/ /pubmed/34720403 http://dx.doi.org/10.1007/s11263-020-01390-3 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Keller, Sebastian Mathias
Samarin, Maxim
Arend Torres, Fabricio
Wieser, Mario
Roth, Volker
Learning Extremal Representations with Deep Archetypal Analysis
title Learning Extremal Representations with Deep Archetypal Analysis
title_full Learning Extremal Representations with Deep Archetypal Analysis
title_fullStr Learning Extremal Representations with Deep Archetypal Analysis
title_full_unstemmed Learning Extremal Representations with Deep Archetypal Analysis
title_short Learning Extremal Representations with Deep Archetypal Analysis
title_sort learning extremal representations with deep archetypal analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8550171/
https://www.ncbi.nlm.nih.gov/pubmed/34720403
http://dx.doi.org/10.1007/s11263-020-01390-3
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