Cargando…
Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis
BACKGROUND: Ganoderma (Lingzhi in Chinese) has shown good clinical outcomes in the treatment of insomnia, restlessness, and palpitation. However, the mechanism by which Ganoderma ameliorates insomnia is unclear. We explored the mechanism of the anti-insomnia effect of Ganoderma using systems pharmac...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8555286/ https://www.ncbi.nlm.nih.gov/pubmed/34715778 http://dx.doi.org/10.1186/s12866-021-02361-5 |
_version_ | 1784591948008390656 |
---|---|
author | Qiu, Yu Mao, Zhu-Jun Ruan, Ye-Ping Zhang, Xin |
author_facet | Qiu, Yu Mao, Zhu-Jun Ruan, Ye-Ping Zhang, Xin |
author_sort | Qiu, Yu |
collection | PubMed |
description | BACKGROUND: Ganoderma (Lingzhi in Chinese) has shown good clinical outcomes in the treatment of insomnia, restlessness, and palpitation. However, the mechanism by which Ganoderma ameliorates insomnia is unclear. We explored the mechanism of the anti-insomnia effect of Ganoderma using systems pharmacology from the perspective of central-peripheral multi-level interaction network analysis. METHODS: The active components and central active components of Ganoderma were obtained from the TCMIP and TCMSP databases, then screened to determine their pharmacokinetic properties. The potential target genes of these components were identified using the Swiss Target Prediction and TCMSP databases. The results were matched with the insomnia target genes obtained from the GeneCards, OMIM, DisGeNET, and TCMIP databases. Overlapping targets were subjected to multi-level interaction network analysis and enrichment analysis using the STRING, Metascape, and BioGPS databases. The networks analysed were protein-protein interaction (PPI), drug-component-target gene, component-target gene-organ, and target gene-extended disease; we also performed gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses. RESULTS: In total, 34 sedative-hypnotic components (including 5 central active components) were identified, corresponding to 51 target genes. Multi-level interaction network analysis and enrichment analysis demonstrated that Ganoderma exerted an anti-insomnia effect via multiple central-peripheral mechanisms simultaneously, mainly by regulating cell apoptosis/survival and cytokine expression through core target genes such as TNF, CASP3, JUN, and HSP90αA1; it also affected immune regulation and apoptosis. Therefore, Ganoderma has potential as an adjuvant therapy for insomnia-related complications. CONCLUSION: Ganoderma exerts an anti-insomnia effect via complex central-peripheral multi-level interaction networks. |
format | Online Article Text |
id | pubmed-8555286 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-85552862021-10-29 Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis Qiu, Yu Mao, Zhu-Jun Ruan, Ye-Ping Zhang, Xin BMC Microbiol Research BACKGROUND: Ganoderma (Lingzhi in Chinese) has shown good clinical outcomes in the treatment of insomnia, restlessness, and palpitation. However, the mechanism by which Ganoderma ameliorates insomnia is unclear. We explored the mechanism of the anti-insomnia effect of Ganoderma using systems pharmacology from the perspective of central-peripheral multi-level interaction network analysis. METHODS: The active components and central active components of Ganoderma were obtained from the TCMIP and TCMSP databases, then screened to determine their pharmacokinetic properties. The potential target genes of these components were identified using the Swiss Target Prediction and TCMSP databases. The results were matched with the insomnia target genes obtained from the GeneCards, OMIM, DisGeNET, and TCMIP databases. Overlapping targets were subjected to multi-level interaction network analysis and enrichment analysis using the STRING, Metascape, and BioGPS databases. The networks analysed were protein-protein interaction (PPI), drug-component-target gene, component-target gene-organ, and target gene-extended disease; we also performed gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses. RESULTS: In total, 34 sedative-hypnotic components (including 5 central active components) were identified, corresponding to 51 target genes. Multi-level interaction network analysis and enrichment analysis demonstrated that Ganoderma exerted an anti-insomnia effect via multiple central-peripheral mechanisms simultaneously, mainly by regulating cell apoptosis/survival and cytokine expression through core target genes such as TNF, CASP3, JUN, and HSP90αA1; it also affected immune regulation and apoptosis. Therefore, Ganoderma has potential as an adjuvant therapy for insomnia-related complications. CONCLUSION: Ganoderma exerts an anti-insomnia effect via complex central-peripheral multi-level interaction networks. BioMed Central 2021-10-29 /pmc/articles/PMC8555286/ /pubmed/34715778 http://dx.doi.org/10.1186/s12866-021-02361-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Qiu, Yu Mao, Zhu-Jun Ruan, Ye-Ping Zhang, Xin Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis |
title | Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis |
title_full | Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis |
title_fullStr | Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis |
title_full_unstemmed | Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis |
title_short | Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis |
title_sort | exploration of the anti-insomnia mechanism of ganoderma by central-peripheral multi-level interaction network analysis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8555286/ https://www.ncbi.nlm.nih.gov/pubmed/34715778 http://dx.doi.org/10.1186/s12866-021-02361-5 |
work_keys_str_mv | AT qiuyu explorationoftheantiinsomniamechanismofganodermabycentralperipheralmultilevelinteractionnetworkanalysis AT maozhujun explorationoftheantiinsomniamechanismofganodermabycentralperipheralmultilevelinteractionnetworkanalysis AT ruanyeping explorationoftheantiinsomniamechanismofganodermabycentralperipheralmultilevelinteractionnetworkanalysis AT zhangxin explorationoftheantiinsomniamechanismofganodermabycentralperipheralmultilevelinteractionnetworkanalysis |