The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China

Epimedium L. is a medicinally important herbaceous genus in the family Berberidaceae. Epimedium fargesii Franch. is only narrowly inhabited in the Daba Mountains in China. Here, we sequenced and assembled the first complete chloroplast genome of Epimedium fargesii Franch. The chloroplast genome of E...

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Detalles Bibliográficos
Autores principales: Liu, Xiang, Zhang, Yixin, Zhang, Cheng, Xu, Chaoqun, Qin, Weihan, Shen, Guoan, Guo, Baolin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8555541/
https://www.ncbi.nlm.nih.gov/pubmed/34722878
http://dx.doi.org/10.1080/23802359.2021.1973922
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author Liu, Xiang
Zhang, Yixin
Zhang, Cheng
Xu, Chaoqun
Qin, Weihan
Shen, Guoan
Guo, Baolin
author_facet Liu, Xiang
Zhang, Yixin
Zhang, Cheng
Xu, Chaoqun
Qin, Weihan
Shen, Guoan
Guo, Baolin
author_sort Liu, Xiang
collection PubMed
description Epimedium L. is a medicinally important herbaceous genus in the family Berberidaceae. Epimedium fargesii Franch. is only narrowly inhabited in the Daba Mountains in China. Here, we sequenced and assembled the first complete chloroplast genome of Epimedium fargesii Franch. The chloroplast genome of E. fargesii was 157,208 bp in length, with a total GC content of 38.77%. A total of 112 unique genes were identified, including 78 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis indicated that E. fargesii formed a sister relationship with E. wushanense T. S. Ying. Our results provided fundamental data for further taxonomic and phylogenetic research of the genus Epimedium.
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spelling pubmed-85555412021-10-30 The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China Liu, Xiang Zhang, Yixin Zhang, Cheng Xu, Chaoqun Qin, Weihan Shen, Guoan Guo, Baolin Mitochondrial DNA B Resour Mitogenome Announcement Epimedium L. is a medicinally important herbaceous genus in the family Berberidaceae. Epimedium fargesii Franch. is only narrowly inhabited in the Daba Mountains in China. Here, we sequenced and assembled the first complete chloroplast genome of Epimedium fargesii Franch. The chloroplast genome of E. fargesii was 157,208 bp in length, with a total GC content of 38.77%. A total of 112 unique genes were identified, including 78 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis indicated that E. fargesii formed a sister relationship with E. wushanense T. S. Ying. Our results provided fundamental data for further taxonomic and phylogenetic research of the genus Epimedium. Taylor & Francis 2021-10-27 /pmc/articles/PMC8555541/ /pubmed/34722878 http://dx.doi.org/10.1080/23802359.2021.1973922 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Xiang
Zhang, Yixin
Zhang, Cheng
Xu, Chaoqun
Qin, Weihan
Shen, Guoan
Guo, Baolin
The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China
title The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China
title_full The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China
title_fullStr The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China
title_full_unstemmed The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China
title_short The complete chloroplast genome of Epimedium fargesii Franch. (Berberidaceae), a rare plant species endemic to China
title_sort complete chloroplast genome of epimedium fargesii franch. (berberidaceae), a rare plant species endemic to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8555541/
https://www.ncbi.nlm.nih.gov/pubmed/34722878
http://dx.doi.org/10.1080/23802359.2021.1973922
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