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Genome-wide association study identifies susceptibility loci for acute myeloid leukemia

Acute myeloid leukemia (AML) is a hematological malignancy with an undefined heritable risk. Here we perform a meta-analysis of three genome-wide association studies, with replication in a fourth study, incorporating a total of 4018 AML cases and 10488 controls. We identify a genome-wide significant...

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Autores principales: Lin, Wei-Yu, Fordham, Sarah E., Hungate, Eric, Sunter, Nicola J., Elstob, Claire, Xu, Yaobo, Park, Catherine, Quante, Anne, Strauch, Konstantin, Gieger, Christian, Skol, Andrew, Rahman, Thahira, Sucheston-Campbell, Lara, Wang, Junke, Hahn, Theresa, Clay-Gilmour, Alyssa I., Jones, Gail L., Marr, Helen J., Jackson, Graham H., Menne, Tobias, Collin, Mathew, Ivey, Adam, Hills, Robert K., Burnett, Alan K., Russell, Nigel H., Fitzgibbon, Jude, Larson, Richard A., Le Beau, Michelle M., Stock, Wendy, Heidenreich, Olaf, Alharbi, Abrar, Allsup, David J., Houlston, Richard S., Norden, Jean, Dickinson, Anne M., Douglas, Elisabeth, Lendrem, Clare, Daly, Ann K., Palm, Louise, Piechocki, Kim, Jeffries, Sally, Bornhäuser, Martin, Röllig, Christoph, Altmann, Heidi, Ruhnke, Leo, Kunadt, Desiree, Wagenführ, Lisa, Cordell, Heather J., Darlay, Rebecca, Andersen, Mette K., Fontana, Maria C., Martinelli, Giovanni, Marconi, Giovanni, Sanz, Miguel A., Cervera, José, Gómez-Seguí, Inés, Cluzeau, Thomas, Moreilhon, Chimène, Raynaud, Sophie, Sill, Heinz, Voso, Maria Teresa, Lo-Coco, Francesco, Dombret, Hervé, Cheok, Meyling, Preudhomme, Claude, Gale, Rosemary E., Linch, David, Gaal-Wesinger, Julia, Masszi, Andras, Nowak, Daniel, Hofmann, Wolf-Karsten, Gilkes, Amanda, Porkka, Kimmo, Milosevic Feenstra, Jelena D., Kralovics, Robert, Grimwade, David, Meggendorfer, Manja, Haferlach, Torsten, Krizsán, Szilvia, Bödör, Csaba, Stölzel, Friedrich, Onel, Kenan, Allan, James M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556284/
https://www.ncbi.nlm.nih.gov/pubmed/34716350
http://dx.doi.org/10.1038/s41467-021-26551-x
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author Lin, Wei-Yu
Fordham, Sarah E.
Hungate, Eric
Sunter, Nicola J.
Elstob, Claire
Xu, Yaobo
Park, Catherine
Quante, Anne
Strauch, Konstantin
Gieger, Christian
Skol, Andrew
Rahman, Thahira
Sucheston-Campbell, Lara
Wang, Junke
Hahn, Theresa
Clay-Gilmour, Alyssa I.
Jones, Gail L.
Marr, Helen J.
Jackson, Graham H.
Menne, Tobias
Collin, Mathew
Ivey, Adam
Hills, Robert K.
Burnett, Alan K.
Russell, Nigel H.
Fitzgibbon, Jude
Larson, Richard A.
Le Beau, Michelle M.
Stock, Wendy
Heidenreich, Olaf
Alharbi, Abrar
Allsup, David J.
Houlston, Richard S.
Norden, Jean
Dickinson, Anne M.
Douglas, Elisabeth
Lendrem, Clare
Daly, Ann K.
Palm, Louise
Piechocki, Kim
Jeffries, Sally
Bornhäuser, Martin
Röllig, Christoph
Altmann, Heidi
Ruhnke, Leo
Kunadt, Desiree
Wagenführ, Lisa
Cordell, Heather J.
Darlay, Rebecca
Andersen, Mette K.
Fontana, Maria C.
Martinelli, Giovanni
Marconi, Giovanni
Sanz, Miguel A.
Cervera, José
Gómez-Seguí, Inés
Cluzeau, Thomas
Moreilhon, Chimène
Raynaud, Sophie
Sill, Heinz
Voso, Maria Teresa
Lo-Coco, Francesco
Dombret, Hervé
Cheok, Meyling
Preudhomme, Claude
Gale, Rosemary E.
Linch, David
Gaal-Wesinger, Julia
Masszi, Andras
Nowak, Daniel
Hofmann, Wolf-Karsten
Gilkes, Amanda
Porkka, Kimmo
Milosevic Feenstra, Jelena D.
Kralovics, Robert
Grimwade, David
Meggendorfer, Manja
Haferlach, Torsten
Krizsán, Szilvia
Bödör, Csaba
Stölzel, Friedrich
Onel, Kenan
Allan, James M.
author_facet Lin, Wei-Yu
Fordham, Sarah E.
Hungate, Eric
Sunter, Nicola J.
Elstob, Claire
Xu, Yaobo
Park, Catherine
Quante, Anne
Strauch, Konstantin
Gieger, Christian
Skol, Andrew
Rahman, Thahira
Sucheston-Campbell, Lara
Wang, Junke
Hahn, Theresa
Clay-Gilmour, Alyssa I.
Jones, Gail L.
Marr, Helen J.
Jackson, Graham H.
Menne, Tobias
Collin, Mathew
Ivey, Adam
Hills, Robert K.
Burnett, Alan K.
Russell, Nigel H.
Fitzgibbon, Jude
Larson, Richard A.
Le Beau, Michelle M.
Stock, Wendy
Heidenreich, Olaf
Alharbi, Abrar
Allsup, David J.
Houlston, Richard S.
Norden, Jean
Dickinson, Anne M.
Douglas, Elisabeth
Lendrem, Clare
Daly, Ann K.
Palm, Louise
Piechocki, Kim
Jeffries, Sally
Bornhäuser, Martin
Röllig, Christoph
Altmann, Heidi
Ruhnke, Leo
Kunadt, Desiree
Wagenführ, Lisa
Cordell, Heather J.
Darlay, Rebecca
Andersen, Mette K.
Fontana, Maria C.
Martinelli, Giovanni
Marconi, Giovanni
Sanz, Miguel A.
Cervera, José
Gómez-Seguí, Inés
Cluzeau, Thomas
Moreilhon, Chimène
Raynaud, Sophie
Sill, Heinz
Voso, Maria Teresa
Lo-Coco, Francesco
Dombret, Hervé
Cheok, Meyling
Preudhomme, Claude
Gale, Rosemary E.
Linch, David
Gaal-Wesinger, Julia
Masszi, Andras
Nowak, Daniel
Hofmann, Wolf-Karsten
Gilkes, Amanda
Porkka, Kimmo
Milosevic Feenstra, Jelena D.
Kralovics, Robert
Grimwade, David
Meggendorfer, Manja
Haferlach, Torsten
Krizsán, Szilvia
Bödör, Csaba
Stölzel, Friedrich
Onel, Kenan
Allan, James M.
author_sort Lin, Wei-Yu
collection PubMed
description Acute myeloid leukemia (AML) is a hematological malignancy with an undefined heritable risk. Here we perform a meta-analysis of three genome-wide association studies, with replication in a fourth study, incorporating a total of 4018 AML cases and 10488 controls. We identify a genome-wide significant risk locus for AML at 11q13.2 (rs4930561; P = 2.15 × 10(−8); KMT5B). We also identify a genome-wide significant risk locus for the cytogenetically normal AML sub-group (N = 1287) at 6p21.32 (rs3916765; P = 1.51 × 10(−10); HLA). Our results inform on AML etiology and identify putative functional genes operating in histone methylation (KMT5B) and immune function (HLA).
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spelling pubmed-85562842021-11-15 Genome-wide association study identifies susceptibility loci for acute myeloid leukemia Lin, Wei-Yu Fordham, Sarah E. Hungate, Eric Sunter, Nicola J. Elstob, Claire Xu, Yaobo Park, Catherine Quante, Anne Strauch, Konstantin Gieger, Christian Skol, Andrew Rahman, Thahira Sucheston-Campbell, Lara Wang, Junke Hahn, Theresa Clay-Gilmour, Alyssa I. Jones, Gail L. Marr, Helen J. Jackson, Graham H. Menne, Tobias Collin, Mathew Ivey, Adam Hills, Robert K. Burnett, Alan K. Russell, Nigel H. Fitzgibbon, Jude Larson, Richard A. Le Beau, Michelle M. Stock, Wendy Heidenreich, Olaf Alharbi, Abrar Allsup, David J. Houlston, Richard S. Norden, Jean Dickinson, Anne M. Douglas, Elisabeth Lendrem, Clare Daly, Ann K. Palm, Louise Piechocki, Kim Jeffries, Sally Bornhäuser, Martin Röllig, Christoph Altmann, Heidi Ruhnke, Leo Kunadt, Desiree Wagenführ, Lisa Cordell, Heather J. Darlay, Rebecca Andersen, Mette K. Fontana, Maria C. Martinelli, Giovanni Marconi, Giovanni Sanz, Miguel A. Cervera, José Gómez-Seguí, Inés Cluzeau, Thomas Moreilhon, Chimène Raynaud, Sophie Sill, Heinz Voso, Maria Teresa Lo-Coco, Francesco Dombret, Hervé Cheok, Meyling Preudhomme, Claude Gale, Rosemary E. Linch, David Gaal-Wesinger, Julia Masszi, Andras Nowak, Daniel Hofmann, Wolf-Karsten Gilkes, Amanda Porkka, Kimmo Milosevic Feenstra, Jelena D. Kralovics, Robert Grimwade, David Meggendorfer, Manja Haferlach, Torsten Krizsán, Szilvia Bödör, Csaba Stölzel, Friedrich Onel, Kenan Allan, James M. Nat Commun Article Acute myeloid leukemia (AML) is a hematological malignancy with an undefined heritable risk. Here we perform a meta-analysis of three genome-wide association studies, with replication in a fourth study, incorporating a total of 4018 AML cases and 10488 controls. We identify a genome-wide significant risk locus for AML at 11q13.2 (rs4930561; P = 2.15 × 10(−8); KMT5B). We also identify a genome-wide significant risk locus for the cytogenetically normal AML sub-group (N = 1287) at 6p21.32 (rs3916765; P = 1.51 × 10(−10); HLA). Our results inform on AML etiology and identify putative functional genes operating in histone methylation (KMT5B) and immune function (HLA). Nature Publishing Group UK 2021-10-29 /pmc/articles/PMC8556284/ /pubmed/34716350 http://dx.doi.org/10.1038/s41467-021-26551-x Text en © The Author(s) 2021, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Lin, Wei-Yu
Fordham, Sarah E.
Hungate, Eric
Sunter, Nicola J.
Elstob, Claire
Xu, Yaobo
Park, Catherine
Quante, Anne
Strauch, Konstantin
Gieger, Christian
Skol, Andrew
Rahman, Thahira
Sucheston-Campbell, Lara
Wang, Junke
Hahn, Theresa
Clay-Gilmour, Alyssa I.
Jones, Gail L.
Marr, Helen J.
Jackson, Graham H.
Menne, Tobias
Collin, Mathew
Ivey, Adam
Hills, Robert K.
Burnett, Alan K.
Russell, Nigel H.
Fitzgibbon, Jude
Larson, Richard A.
Le Beau, Michelle M.
Stock, Wendy
Heidenreich, Olaf
Alharbi, Abrar
Allsup, David J.
Houlston, Richard S.
Norden, Jean
Dickinson, Anne M.
Douglas, Elisabeth
Lendrem, Clare
Daly, Ann K.
Palm, Louise
Piechocki, Kim
Jeffries, Sally
Bornhäuser, Martin
Röllig, Christoph
Altmann, Heidi
Ruhnke, Leo
Kunadt, Desiree
Wagenführ, Lisa
Cordell, Heather J.
Darlay, Rebecca
Andersen, Mette K.
Fontana, Maria C.
Martinelli, Giovanni
Marconi, Giovanni
Sanz, Miguel A.
Cervera, José
Gómez-Seguí, Inés
Cluzeau, Thomas
Moreilhon, Chimène
Raynaud, Sophie
Sill, Heinz
Voso, Maria Teresa
Lo-Coco, Francesco
Dombret, Hervé
Cheok, Meyling
Preudhomme, Claude
Gale, Rosemary E.
Linch, David
Gaal-Wesinger, Julia
Masszi, Andras
Nowak, Daniel
Hofmann, Wolf-Karsten
Gilkes, Amanda
Porkka, Kimmo
Milosevic Feenstra, Jelena D.
Kralovics, Robert
Grimwade, David
Meggendorfer, Manja
Haferlach, Torsten
Krizsán, Szilvia
Bödör, Csaba
Stölzel, Friedrich
Onel, Kenan
Allan, James M.
Genome-wide association study identifies susceptibility loci for acute myeloid leukemia
title Genome-wide association study identifies susceptibility loci for acute myeloid leukemia
title_full Genome-wide association study identifies susceptibility loci for acute myeloid leukemia
title_fullStr Genome-wide association study identifies susceptibility loci for acute myeloid leukemia
title_full_unstemmed Genome-wide association study identifies susceptibility loci for acute myeloid leukemia
title_short Genome-wide association study identifies susceptibility loci for acute myeloid leukemia
title_sort genome-wide association study identifies susceptibility loci for acute myeloid leukemia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556284/
https://www.ncbi.nlm.nih.gov/pubmed/34716350
http://dx.doi.org/10.1038/s41467-021-26551-x
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