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Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning

Due to their ability to recognize complex patterns, neural networks can drive a paradigm shift in the analysis of materials science data. Here, we introduce ARISE, a crystal-structure identification method based on Bayesian deep learning. As a major step forward, ARISE is robust to structural noise...

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Autores principales: Leitherer, Andreas, Ziletti, Angelo, Ghiringhelli, Luca M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556392/
https://www.ncbi.nlm.nih.gov/pubmed/34716341
http://dx.doi.org/10.1038/s41467-021-26511-5
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author Leitherer, Andreas
Ziletti, Angelo
Ghiringhelli, Luca M.
author_facet Leitherer, Andreas
Ziletti, Angelo
Ghiringhelli, Luca M.
author_sort Leitherer, Andreas
collection PubMed
description Due to their ability to recognize complex patterns, neural networks can drive a paradigm shift in the analysis of materials science data. Here, we introduce ARISE, a crystal-structure identification method based on Bayesian deep learning. As a major step forward, ARISE is robust to structural noise and can treat more than 100 crystal structures, a number that can be extended on demand. While being trained on ideal structures only, ARISE correctly characterizes strongly perturbed single- and polycrystalline systems, from both synthetic and experimental resources. The probabilistic nature of the Bayesian-deep-learning model allows to obtain principled uncertainty estimates, which are found to be correlated with crystalline order of metallic nanoparticles in electron tomography experiments. Applying unsupervised learning to the internal neural-network representations reveals grain boundaries and (unapparent) structural regions sharing easily interpretable geometrical properties. This work enables the hitherto hindered analysis of noisy atomic structural data from computations or experiments.
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spelling pubmed-85563922021-11-15 Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning Leitherer, Andreas Ziletti, Angelo Ghiringhelli, Luca M. Nat Commun Article Due to their ability to recognize complex patterns, neural networks can drive a paradigm shift in the analysis of materials science data. Here, we introduce ARISE, a crystal-structure identification method based on Bayesian deep learning. As a major step forward, ARISE is robust to structural noise and can treat more than 100 crystal structures, a number that can be extended on demand. While being trained on ideal structures only, ARISE correctly characterizes strongly perturbed single- and polycrystalline systems, from both synthetic and experimental resources. The probabilistic nature of the Bayesian-deep-learning model allows to obtain principled uncertainty estimates, which are found to be correlated with crystalline order of metallic nanoparticles in electron tomography experiments. Applying unsupervised learning to the internal neural-network representations reveals grain boundaries and (unapparent) structural regions sharing easily interpretable geometrical properties. This work enables the hitherto hindered analysis of noisy atomic structural data from computations or experiments. Nature Publishing Group UK 2021-10-29 /pmc/articles/PMC8556392/ /pubmed/34716341 http://dx.doi.org/10.1038/s41467-021-26511-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Leitherer, Andreas
Ziletti, Angelo
Ghiringhelli, Luca M.
Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning
title Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning
title_full Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning
title_fullStr Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning
title_full_unstemmed Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning
title_short Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning
title_sort robust recognition and exploratory analysis of crystal structures via bayesian deep learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556392/
https://www.ncbi.nlm.nih.gov/pubmed/34716341
http://dx.doi.org/10.1038/s41467-021-26511-5
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