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Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning
Due to their ability to recognize complex patterns, neural networks can drive a paradigm shift in the analysis of materials science data. Here, we introduce ARISE, a crystal-structure identification method based on Bayesian deep learning. As a major step forward, ARISE is robust to structural noise...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556392/ https://www.ncbi.nlm.nih.gov/pubmed/34716341 http://dx.doi.org/10.1038/s41467-021-26511-5 |
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author | Leitherer, Andreas Ziletti, Angelo Ghiringhelli, Luca M. |
author_facet | Leitherer, Andreas Ziletti, Angelo Ghiringhelli, Luca M. |
author_sort | Leitherer, Andreas |
collection | PubMed |
description | Due to their ability to recognize complex patterns, neural networks can drive a paradigm shift in the analysis of materials science data. Here, we introduce ARISE, a crystal-structure identification method based on Bayesian deep learning. As a major step forward, ARISE is robust to structural noise and can treat more than 100 crystal structures, a number that can be extended on demand. While being trained on ideal structures only, ARISE correctly characterizes strongly perturbed single- and polycrystalline systems, from both synthetic and experimental resources. The probabilistic nature of the Bayesian-deep-learning model allows to obtain principled uncertainty estimates, which are found to be correlated with crystalline order of metallic nanoparticles in electron tomography experiments. Applying unsupervised learning to the internal neural-network representations reveals grain boundaries and (unapparent) structural regions sharing easily interpretable geometrical properties. This work enables the hitherto hindered analysis of noisy atomic structural data from computations or experiments. |
format | Online Article Text |
id | pubmed-8556392 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-85563922021-11-15 Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning Leitherer, Andreas Ziletti, Angelo Ghiringhelli, Luca M. Nat Commun Article Due to their ability to recognize complex patterns, neural networks can drive a paradigm shift in the analysis of materials science data. Here, we introduce ARISE, a crystal-structure identification method based on Bayesian deep learning. As a major step forward, ARISE is robust to structural noise and can treat more than 100 crystal structures, a number that can be extended on demand. While being trained on ideal structures only, ARISE correctly characterizes strongly perturbed single- and polycrystalline systems, from both synthetic and experimental resources. The probabilistic nature of the Bayesian-deep-learning model allows to obtain principled uncertainty estimates, which are found to be correlated with crystalline order of metallic nanoparticles in electron tomography experiments. Applying unsupervised learning to the internal neural-network representations reveals grain boundaries and (unapparent) structural regions sharing easily interpretable geometrical properties. This work enables the hitherto hindered analysis of noisy atomic structural data from computations or experiments. Nature Publishing Group UK 2021-10-29 /pmc/articles/PMC8556392/ /pubmed/34716341 http://dx.doi.org/10.1038/s41467-021-26511-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Leitherer, Andreas Ziletti, Angelo Ghiringhelli, Luca M. Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning |
title | Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning |
title_full | Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning |
title_fullStr | Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning |
title_full_unstemmed | Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning |
title_short | Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning |
title_sort | robust recognition and exploratory analysis of crystal structures via bayesian deep learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556392/ https://www.ncbi.nlm.nih.gov/pubmed/34716341 http://dx.doi.org/10.1038/s41467-021-26511-5 |
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