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Decision and feature level fusion of deep features extracted from public COVID-19 data-sets

The Coronavirus disease (COVID-19), which is an infectious pulmonary disorder, has affected millions of people and has been declared as a global pandemic by the WHO. Due to highly contagious nature of COVID-19 and its high possibility of causing severe conditions in the patients, the development of...

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Autores principales: Ilhan, Hamza Osman, Serbes, Gorkem, Aydin, Nizamettin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556802/
https://www.ncbi.nlm.nih.gov/pubmed/34764623
http://dx.doi.org/10.1007/s10489-021-02945-8
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author Ilhan, Hamza Osman
Serbes, Gorkem
Aydin, Nizamettin
author_facet Ilhan, Hamza Osman
Serbes, Gorkem
Aydin, Nizamettin
author_sort Ilhan, Hamza Osman
collection PubMed
description The Coronavirus disease (COVID-19), which is an infectious pulmonary disorder, has affected millions of people and has been declared as a global pandemic by the WHO. Due to highly contagious nature of COVID-19 and its high possibility of causing severe conditions in the patients, the development of rapid and accurate diagnostic tools have gained importance. The real-time reverse transcription-polymerize chain reaction (RT-PCR) is used to detect the presence of Coronavirus RNA by using the mucus and saliva mixture samples taken by the nasopharyngeal swab technique. But, RT-PCR suffers from having low-sensitivity especially in the early stage. Therefore, the usage of chest radiography has been increasing in the early diagnosis of COVID-19 due to its fast imaging speed, significantly low cost and low dosage exposure of radiation. In our study, a computer-aided diagnosis system for X-ray images based on convolutional neural networks (CNNs) and ensemble learning idea, which can be used by radiologists as a supporting tool in COVID-19 detection, has been proposed. Deep feature sets extracted by using seven CNN architectures were concatenated for feature level fusion and fed to multiple classifiers in terms of decision level fusion idea with the aim of discriminating COVID-19, pneumonia and no-finding classes. In the decision level fusion idea, a majority voting scheme was applied to the resultant decisions of classifiers. The obtained accuracy values and confusion matrix based evaluation criteria were presented for three progressively created data-sets. The aspects of the proposed method that are superior to existing COVID-19 detection studies have been discussed and the fusion performance of proposed approach was validated visually by using Class Activation Mapping technique. The experimental results show that the proposed approach has attained high COVID-19 detection performance that was proven by its comparable accuracy and superior precision/recall values with the existing studies.
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spelling pubmed-85568022021-11-01 Decision and feature level fusion of deep features extracted from public COVID-19 data-sets Ilhan, Hamza Osman Serbes, Gorkem Aydin, Nizamettin Appl Intell (Dordr) Article The Coronavirus disease (COVID-19), which is an infectious pulmonary disorder, has affected millions of people and has been declared as a global pandemic by the WHO. Due to highly contagious nature of COVID-19 and its high possibility of causing severe conditions in the patients, the development of rapid and accurate diagnostic tools have gained importance. The real-time reverse transcription-polymerize chain reaction (RT-PCR) is used to detect the presence of Coronavirus RNA by using the mucus and saliva mixture samples taken by the nasopharyngeal swab technique. But, RT-PCR suffers from having low-sensitivity especially in the early stage. Therefore, the usage of chest radiography has been increasing in the early diagnosis of COVID-19 due to its fast imaging speed, significantly low cost and low dosage exposure of radiation. In our study, a computer-aided diagnosis system for X-ray images based on convolutional neural networks (CNNs) and ensemble learning idea, which can be used by radiologists as a supporting tool in COVID-19 detection, has been proposed. Deep feature sets extracted by using seven CNN architectures were concatenated for feature level fusion and fed to multiple classifiers in terms of decision level fusion idea with the aim of discriminating COVID-19, pneumonia and no-finding classes. In the decision level fusion idea, a majority voting scheme was applied to the resultant decisions of classifiers. The obtained accuracy values and confusion matrix based evaluation criteria were presented for three progressively created data-sets. The aspects of the proposed method that are superior to existing COVID-19 detection studies have been discussed and the fusion performance of proposed approach was validated visually by using Class Activation Mapping technique. The experimental results show that the proposed approach has attained high COVID-19 detection performance that was proven by its comparable accuracy and superior precision/recall values with the existing studies. Springer US 2021-10-30 2022 /pmc/articles/PMC8556802/ /pubmed/34764623 http://dx.doi.org/10.1007/s10489-021-02945-8 Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Ilhan, Hamza Osman
Serbes, Gorkem
Aydin, Nizamettin
Decision and feature level fusion of deep features extracted from public COVID-19 data-sets
title Decision and feature level fusion of deep features extracted from public COVID-19 data-sets
title_full Decision and feature level fusion of deep features extracted from public COVID-19 data-sets
title_fullStr Decision and feature level fusion of deep features extracted from public COVID-19 data-sets
title_full_unstemmed Decision and feature level fusion of deep features extracted from public COVID-19 data-sets
title_short Decision and feature level fusion of deep features extracted from public COVID-19 data-sets
title_sort decision and feature level fusion of deep features extracted from public covid-19 data-sets
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8556802/
https://www.ncbi.nlm.nih.gov/pubmed/34764623
http://dx.doi.org/10.1007/s10489-021-02945-8
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