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RdRp or RT, That is the Question
The RNA-dependent RNA polymerase (RdRp) of all known double-stranded RNA viruses is located within the viral particle and is responsible for the transcription and replication of the viral genome. Through an RT-PCR assay, we determined that purified virions, in vitro translated RdRp proteins, and pur...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8557412/ https://www.ncbi.nlm.nih.gov/pubmed/34352104 http://dx.doi.org/10.1093/molbev/msab235 |
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author | Peyambari, Mahtab Guan, Shengxi Roossinck, Marilyn J |
author_facet | Peyambari, Mahtab Guan, Shengxi Roossinck, Marilyn J |
author_sort | Peyambari, Mahtab |
collection | PubMed |
description | The RNA-dependent RNA polymerase (RdRp) of all known double-stranded RNA viruses is located within the viral particle and is responsible for the transcription and replication of the viral genome. Through an RT-PCR assay, we determined that purified virions, in vitro translated RdRp proteins, and purified recombinant RdRp proteins of partitiviruses also have reverse transcriptase (RT) function. We show that partitivirus RdRps 1) synthesized DNA from homologous and heterologous dsRNA templates; 2) are active using both ssRNA and dsRNA templates; and 3) are active at lower temperatures compared to an optimal reaction temperature of commercial RT enzymes. This finding poses an intriguing question: why do partitiviruses, with dsRNA genomes, have a polymerase with RT functions? In comparison, 3Dpol, the RdRp of poliovirus, did not show any RT activity. Our findings lead us to propose a new evolutionary model for RNA viruses where the RdRp of dsRNA viruses could be the ancestor of RdRps. |
format | Online Article Text |
id | pubmed-8557412 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-85574122021-11-01 RdRp or RT, That is the Question Peyambari, Mahtab Guan, Shengxi Roossinck, Marilyn J Mol Biol Evol Discoveries The RNA-dependent RNA polymerase (RdRp) of all known double-stranded RNA viruses is located within the viral particle and is responsible for the transcription and replication of the viral genome. Through an RT-PCR assay, we determined that purified virions, in vitro translated RdRp proteins, and purified recombinant RdRp proteins of partitiviruses also have reverse transcriptase (RT) function. We show that partitivirus RdRps 1) synthesized DNA from homologous and heterologous dsRNA templates; 2) are active using both ssRNA and dsRNA templates; and 3) are active at lower temperatures compared to an optimal reaction temperature of commercial RT enzymes. This finding poses an intriguing question: why do partitiviruses, with dsRNA genomes, have a polymerase with RT functions? In comparison, 3Dpol, the RdRp of poliovirus, did not show any RT activity. Our findings lead us to propose a new evolutionary model for RNA viruses where the RdRp of dsRNA viruses could be the ancestor of RdRps. Oxford University Press 2021-08-05 /pmc/articles/PMC8557412/ /pubmed/34352104 http://dx.doi.org/10.1093/molbev/msab235 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Discoveries Peyambari, Mahtab Guan, Shengxi Roossinck, Marilyn J RdRp or RT, That is the Question |
title | RdRp or RT, That is the Question |
title_full | RdRp or RT, That is the Question |
title_fullStr | RdRp or RT, That is the Question |
title_full_unstemmed | RdRp or RT, That is the Question |
title_short | RdRp or RT, That is the Question |
title_sort | rdrp or rt, that is the question |
topic | Discoveries |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8557412/ https://www.ncbi.nlm.nih.gov/pubmed/34352104 http://dx.doi.org/10.1093/molbev/msab235 |
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