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Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists

The concept of reverse chemical ecology (exploitation of molecular knowledge for chemical ecology) has recently emerged in conservation biology and human health. Here, we extend this concept to crop protection. Targeting odorant receptors from a crop pest insect, the noctuid moth Spodoptera littoral...

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Autores principales: Caballero-Vidal, Gabriela, Bouysset, Cédric, Gévar, Jérémy, Mbouzid, Hayat, Nara, Céline, Delaroche, Julie, Golebiowski, Jérôme, Montagné, Nicolas, Fiorucci, Sébastien, Jacquin-Joly, Emmanuelle
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558168/
https://www.ncbi.nlm.nih.gov/pubmed/34448011
http://dx.doi.org/10.1007/s00018-021-03919-2
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author Caballero-Vidal, Gabriela
Bouysset, Cédric
Gévar, Jérémy
Mbouzid, Hayat
Nara, Céline
Delaroche, Julie
Golebiowski, Jérôme
Montagné, Nicolas
Fiorucci, Sébastien
Jacquin-Joly, Emmanuelle
author_facet Caballero-Vidal, Gabriela
Bouysset, Cédric
Gévar, Jérémy
Mbouzid, Hayat
Nara, Céline
Delaroche, Julie
Golebiowski, Jérôme
Montagné, Nicolas
Fiorucci, Sébastien
Jacquin-Joly, Emmanuelle
author_sort Caballero-Vidal, Gabriela
collection PubMed
description The concept of reverse chemical ecology (exploitation of molecular knowledge for chemical ecology) has recently emerged in conservation biology and human health. Here, we extend this concept to crop protection. Targeting odorant receptors from a crop pest insect, the noctuid moth Spodoptera littoralis, we demonstrate that reverse chemical ecology has the potential to accelerate the discovery of novel crop pest insect attractants and repellents. Using machine learning, we first predicted novel natural ligands for two odorant receptors, SlitOR24 and 25. Then, electrophysiological validation proved in silico predictions to be highly sensitive, as 93% and 67% of predicted agonists triggered a response in Drosophila olfactory neurons expressing SlitOR24 and SlitOR25, respectively, despite a lack of specificity. Last, when tested in Y-maze behavioral assays, the most active novel ligands of the receptors were attractive to caterpillars. This work provides a template for rational design of new eco-friendly semiochemicals to manage crop pest populations. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00018-021-03919-2.
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spelling pubmed-85581682021-11-15 Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists Caballero-Vidal, Gabriela Bouysset, Cédric Gévar, Jérémy Mbouzid, Hayat Nara, Céline Delaroche, Julie Golebiowski, Jérôme Montagné, Nicolas Fiorucci, Sébastien Jacquin-Joly, Emmanuelle Cell Mol Life Sci Original Article The concept of reverse chemical ecology (exploitation of molecular knowledge for chemical ecology) has recently emerged in conservation biology and human health. Here, we extend this concept to crop protection. Targeting odorant receptors from a crop pest insect, the noctuid moth Spodoptera littoralis, we demonstrate that reverse chemical ecology has the potential to accelerate the discovery of novel crop pest insect attractants and repellents. Using machine learning, we first predicted novel natural ligands for two odorant receptors, SlitOR24 and 25. Then, electrophysiological validation proved in silico predictions to be highly sensitive, as 93% and 67% of predicted agonists triggered a response in Drosophila olfactory neurons expressing SlitOR24 and SlitOR25, respectively, despite a lack of specificity. Last, when tested in Y-maze behavioral assays, the most active novel ligands of the receptors were attractive to caterpillars. This work provides a template for rational design of new eco-friendly semiochemicals to manage crop pest populations. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00018-021-03919-2. Springer International Publishing 2021-08-27 2021 /pmc/articles/PMC8558168/ /pubmed/34448011 http://dx.doi.org/10.1007/s00018-021-03919-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Caballero-Vidal, Gabriela
Bouysset, Cédric
Gévar, Jérémy
Mbouzid, Hayat
Nara, Céline
Delaroche, Julie
Golebiowski, Jérôme
Montagné, Nicolas
Fiorucci, Sébastien
Jacquin-Joly, Emmanuelle
Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists
title Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists
title_full Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists
title_fullStr Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists
title_full_unstemmed Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists
title_short Reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists
title_sort reverse chemical ecology in a moth: machine learning on odorant receptors identifies new behaviorally active agonists
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558168/
https://www.ncbi.nlm.nih.gov/pubmed/34448011
http://dx.doi.org/10.1007/s00018-021-03919-2
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