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Gene4HL: An Integrated Genetic Database for Hearing Loss
Hearing loss (HL) is one of the most common disabilities in the world. In industrialized countries, HL occurs in 1–2/1,000 newborns, and approximately 60% of HL is caused by genetic factors. Next generation sequencing (NGS) has been widely used to identify many candidate genes and variants in patien...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558372/ https://www.ncbi.nlm.nih.gov/pubmed/34733322 http://dx.doi.org/10.3389/fgene.2021.773009 |
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author | Huang, Shasha Zhao, Guihu Wu, Jie Li, Kuokuo Wang, Qiuquan Fu, Ying Zhang, Honglei Bi, Qingling Li, Xiaohong Wang, Weiqian Guo, Chang Zhang, Dejun Wu, Lihua Li, Xiaoge Xu, Huiyan Han, Mingyu Wang, Xin Lei, Chen Qiu, Xiaofang Li, Yang Li, Jinchen Dai, Pu Yuan, Yongyi |
author_facet | Huang, Shasha Zhao, Guihu Wu, Jie Li, Kuokuo Wang, Qiuquan Fu, Ying Zhang, Honglei Bi, Qingling Li, Xiaohong Wang, Weiqian Guo, Chang Zhang, Dejun Wu, Lihua Li, Xiaoge Xu, Huiyan Han, Mingyu Wang, Xin Lei, Chen Qiu, Xiaofang Li, Yang Li, Jinchen Dai, Pu Yuan, Yongyi |
author_sort | Huang, Shasha |
collection | PubMed |
description | Hearing loss (HL) is one of the most common disabilities in the world. In industrialized countries, HL occurs in 1–2/1,000 newborns, and approximately 60% of HL is caused by genetic factors. Next generation sequencing (NGS) has been widely used to identify many candidate genes and variants in patients with HL, but the data are scattered in multitudinous studies. It is a challenge for scientists, clinicians, and biologists to easily obtain and analyze HL genes and variant data from these studies. Thus, we developed a one-stop database of HL-related genes and variants, Gene4HL (http://www.genemed.tech/gene4hl/), making it easy to catalog, search, browse and analyze the genetic data. Gene4HL integrates the detailed genetic and clinical data of 326 HL-related genes from 1,608 published studies, along with 62 popular genetic data sources to provide comprehensive knowledge of candidate genes and variants associated with HL. Additionally, Gene4HL supports the users to analyze their own genetic engineering network data, performs comprehensive annotation, and prioritizes candidate genes and variations using custom parameters. Thus, Gene4HL can help users explain the function of HL genes and the clinical significance of variants by correlating the genotypes and phenotypes in humans. |
format | Online Article Text |
id | pubmed-8558372 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85583722021-11-02 Gene4HL: An Integrated Genetic Database for Hearing Loss Huang, Shasha Zhao, Guihu Wu, Jie Li, Kuokuo Wang, Qiuquan Fu, Ying Zhang, Honglei Bi, Qingling Li, Xiaohong Wang, Weiqian Guo, Chang Zhang, Dejun Wu, Lihua Li, Xiaoge Xu, Huiyan Han, Mingyu Wang, Xin Lei, Chen Qiu, Xiaofang Li, Yang Li, Jinchen Dai, Pu Yuan, Yongyi Front Genet Genetics Hearing loss (HL) is one of the most common disabilities in the world. In industrialized countries, HL occurs in 1–2/1,000 newborns, and approximately 60% of HL is caused by genetic factors. Next generation sequencing (NGS) has been widely used to identify many candidate genes and variants in patients with HL, but the data are scattered in multitudinous studies. It is a challenge for scientists, clinicians, and biologists to easily obtain and analyze HL genes and variant data from these studies. Thus, we developed a one-stop database of HL-related genes and variants, Gene4HL (http://www.genemed.tech/gene4hl/), making it easy to catalog, search, browse and analyze the genetic data. Gene4HL integrates the detailed genetic and clinical data of 326 HL-related genes from 1,608 published studies, along with 62 popular genetic data sources to provide comprehensive knowledge of candidate genes and variants associated with HL. Additionally, Gene4HL supports the users to analyze their own genetic engineering network data, performs comprehensive annotation, and prioritizes candidate genes and variations using custom parameters. Thus, Gene4HL can help users explain the function of HL genes and the clinical significance of variants by correlating the genotypes and phenotypes in humans. Frontiers Media S.A. 2021-10-18 /pmc/articles/PMC8558372/ /pubmed/34733322 http://dx.doi.org/10.3389/fgene.2021.773009 Text en Copyright © 2021 Huang, Zhao, Wu, Li, Wang, Fu, Zhang, Bi, Li, Wang, Guo, Zhang, Wu, Li, Xu, Han, Wang, Lei, Qiu, Li, Li, Dai and Yuan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Huang, Shasha Zhao, Guihu Wu, Jie Li, Kuokuo Wang, Qiuquan Fu, Ying Zhang, Honglei Bi, Qingling Li, Xiaohong Wang, Weiqian Guo, Chang Zhang, Dejun Wu, Lihua Li, Xiaoge Xu, Huiyan Han, Mingyu Wang, Xin Lei, Chen Qiu, Xiaofang Li, Yang Li, Jinchen Dai, Pu Yuan, Yongyi Gene4HL: An Integrated Genetic Database for Hearing Loss |
title | Gene4HL: An Integrated Genetic Database for Hearing Loss |
title_full | Gene4HL: An Integrated Genetic Database for Hearing Loss |
title_fullStr | Gene4HL: An Integrated Genetic Database for Hearing Loss |
title_full_unstemmed | Gene4HL: An Integrated Genetic Database for Hearing Loss |
title_short | Gene4HL: An Integrated Genetic Database for Hearing Loss |
title_sort | gene4hl: an integrated genetic database for hearing loss |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558372/ https://www.ncbi.nlm.nih.gov/pubmed/34733322 http://dx.doi.org/10.3389/fgene.2021.773009 |
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